| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is tonB2
Identifier: 110834831
GI number: 110834831
Start: 2248776
End: 2249504
Strand: Direct
Name: tonB2
Synonym: ABO_1970
Alternate gene names: NA
Gene position: 2248776-2249504 (Clockwise)
Preceding gene: 110834830
Following gene: 110834832
Centisome position: 72.07
GC content: 56.1
Gene sequence:
>729_bases ATGAAACCCCGTAATCTCACCGCTTGGATCGTCTCCATTCTAATTCACGTCAGCGTGCTGGTTACCGTTGGCGCCATGAC GCTTGCCGGTGGCCGCCCCGCAAAACCGGGCGTTAGTGAAATTGCCATTAACCTGTCTGCTCCACCAGCCCCAAAGGCTG CGCCGAAAGCGATACCGCCAAAGGCCCAGCCCGCCCCGCAACCGAGAGTCAAACCAAAACCAAAACCCAAGCCTACGCCC AAACCGGTCGCAAAACCGAAACCGGAACCCAAGCCAGAGCCAGCCCCACAACCTCAGGTAGCAGAAACTGCGGCCACGAA AACCGAGAATGAAGACACCCACGAAGAAGCCTCGGCACAGCCCCTGACTCAAGGCGCCAAAGGCATGGCGGGCGCCCCAG GAAAAGGAGTGCATCAATCCGGTGATACAGAAAATGCGCTCAACAAATACCTAGCAAAAGTGCGCGACACCATCGATTAC AACAAGCAGTATCCGCACCGGGCTAAAATGCGCCGCCAACAAGGGACCGTTAAGGTGTCTTTTGTAATCAATGCGTCTGG GCGCGCCGAACAGGTAAAGATCACGAAAAGTTCCGGCAGTCGTATTCTGGACCGCGCCACCCAGGAGCTCGTTTCAAGGT TACGCTTCGACGCCCCCCCCAAAGAGCTGGATAGCAGCCTACCTGTACACGTTATTGCACCGGTGAATTACGATCTGAGC AATGGCTAA
Upstream 100 bases:
>100_bases TGCGCAGGCGTTTGGAAACCCTGCAAGGCATGGGTGTGGAACAGGTTCGGCTGGTGACGCAGAGTGACGCAGCAGCAGAA AGCGCCAGCAAGGTGGCACC
Downstream 100 bases:
>100_bases CGCCATTACCTCGGCGGCGATCTCTTCCTCCGTCCCGAGTTGATCCCCTGCGCACCTGTCTTTACTGTTGAATGCTTGAT TAAACAATCACGCTGTCTGG
Product: ferric siderophore transport system periplasmic binding protein
Products: NA
Alternate protein names: NB Protein; NB Family Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKPRNLTAWIVSILIHVSVLVTVGAMTLAGGRPAKPGVSEIAINLSAPPAPKAAPKAIPPKAQPAPQPRVKPKPKPKPTP KPVAKPKPEPKPEPAPQPQVAETAATKTENEDTHEEASAQPLTQGAKGMAGAPGKGVHQSGDTENALNKYLAKVRDTIDY NKQYPHRAKMRRQQGTVKVSFVINASGRAEQVKITKSSGSRILDRATQELVSRLRFDAPPKELDSSLPVHVIAPVNYDLS NG
Sequences:
>Translated_242_residues MKPRNLTAWIVSILIHVSVLVTVGAMTLAGGRPAKPGVSEIAINLSAPPAPKAAPKAIPPKAQPAPQPRVKPKPKPKPTP KPVAKPKPEPKPEPAPQPQVAETAATKTENEDTHEEASAQPLTQGAKGMAGAPGKGVHQSGDTENALNKYLAKVRDTIDY NKQYPHRAKMRRQQGTVKVSFVINASGRAEQVKITKSSGSRILDRATQELVSRLRFDAPPKELDSSLPVHVIAPVNYDLS NG >Mature_242_residues MKPRNLTAWIVSILIHVSVLVTVGAMTLAGGRPAKPGVSEIAINLSAPPAPKAAPKAIPPKAQPAPQPRVKPKPKPKPTP KPVAKPKPEPKPEPAPQPQVAETAATKTENEDTHEEASAQPLTQGAKGMAGAPGKGVHQSGDTENALNKYLAKVRDTIDY NKQYPHRAKMRRQQGTVKVSFVINASGRAEQVKITKSSGSRILDRATQELVSRLRFDAPPKELDSSLPVHVIAPVNYDLS NG
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25820; Mature: 25820
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRNLTAWIVSILIHVSVLVTVGAMTLAGGRPAKPGVSEIAINLSAPPAPKAAPKAIPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCC KAQPAPQPRVKPKPKPKPTPKPVAKPKPEPKPEPAPQPQVAETAATKTENEDTHEEASAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCC PLTQGAKGMAGAPGKGVHQSGDTENALNKYLAKVRDTIDYNKQYPHRAKMRRQQGTVKVS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE FVINASGRAEQVKITKSSGSRILDRATQELVSRLRFDAPPKELDSSLPVHVIAPVNYDLS EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCC NG CC >Mature Secondary Structure MKPRNLTAWIVSILIHVSVLVTVGAMTLAGGRPAKPGVSEIAINLSAPPAPKAAPKAIPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCC KAQPAPQPRVKPKPKPKPTPKPVAKPKPEPKPEPAPQPQVAETAATKTENEDTHEEASAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCC PLTQGAKGMAGAPGKGVHQSGDTENALNKYLAKVRDTIDYNKQYPHRAKMRRQQGTVKVS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE FVINASGRAEQVKITKSSGSRILDRATQELVSRLRFDAPPKELDSSLPVHVIAPVNYDLS EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCC NG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA