| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is mltB [H]
Identifier: 110834818
GI number: 110834818
Start: 2237615
End: 2238730
Strand: Direct
Name: mltB [H]
Synonym: ABO_1957
Alternate gene names: 110834818
Gene position: 2237615-2238730 (Clockwise)
Preceding gene: 110834817
Following gene: 110834819
Centisome position: 71.72
GC content: 54.39
Gene sequence:
>1116_bases ATGGAAATAATGAAAACAGGAGAACCCCCTTTGCGTCGTTTCTATCTAGGCATTCTAAACATTTTCCGCTCCGGCACGGC GTATTCAGCCATCGCGGTCGCAGCCCTGTTCTTCACCTCCCTGCCTGCCTTAGCCGAGCATACCTGCCCTGAAAACAACG ACTATCTGCAGCGCAAACAAGTCCAAGCTCTAATAGCCGAGCTCGTCTCGCAAGGACAAGATGAGGCACGATTGCGAGAG GTTCTGGGCAGCGCGCAATGCCAACCCCAGATTCTCAAATCCATTGCTCGCCCTGCAGAAAGAACCCATACCTGGGCCAC TTATCAGAAAATTTTCCTACAGGAAAGCCGGGTTCAGAAAGGTATTGAATTCGCCCACACCCACGCCAAGACCTTGACCC GCGCCGAACAAACCTACGGCGTACCGCGAGAAATTATTCTCGCCATCATTGGTGTGGAAACCCGCTACGGTGATCACATG GGCAACTACCGTGTGGTCGATGCGCTGGCCACACTGGGCTATGACTACCCTCCCCGAGGAAGCTTCTTCCGCAAACAGCT CAAAGCACTGTTTGAATTGGAACACCATGCCCATATTGACGCGAACACGATCACCGGCTCTTACGCGGGGGCCATGGGCT ATGGCCAGTTTATCCCCACCAGTTACCAAGCCTACGCAGTGGATTTTGACAACGACGGTATCACCGATCTGGTCAATAAT CCGGTGGATGCCATTGGCTCCGTGGCCAACTATTTCAGCGAACATAACTGGCAACCCGGTTTGCCCGTGGCTGCCAGAGC TCGCTTACACGGTACCGGTTATGTCGCGCTGGCCAAGAAAGGTTACAAGCCATCCTTTACTCTGGCACAAGCCAACAGTG CCGGCGTCACCGCACTCAGCTGCAACGACGATCGGCTGGTTAGTGAATACTGCTTTGATCTGCCCGCCAGCACCCGCGTC GCCCTACTCGACCTGACCGGAACCGATGGCGCAGAATTTTGGCTGGCCACCGACAACTTTTATGTGATCACCCGCTACAA TCACAGTCGCCTGTACGCCATGGCCGTGCTACAACTATCACGACAATTGGCTGCGGCACTGGAGGATAATCAATGA
Upstream 100 bases:
>100_bases TTTTGGGATGTTGATGTCAATTCACACCCATCGGCGCCTAATGAGTTATTAAACGTGAAGCCGGCCCCCTAGTGCGCCGG TTTCCAACAAAACGCAGTCC
Downstream 100 bases:
>100_bases ACCGTTTGGCTTGCGCCGTACTGACCTCTGCCTTTCTCGGCGCCTGTGCCACAACGCCAGGGCCCAATGATGGCAATGAC GGCCCAGGTGCCAGCAACGG
Product: membrane-bound lytic murein transglycosylase B
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MEIMKTGEPPLRRFYLGILNIFRSGTAYSAIAVAALFFTSLPALAEHTCPENNDYLQRKQVQALIAELVSQGQDEARLRE VLGSAQCQPQILKSIARPAERTHTWATYQKIFLQESRVQKGIEFAHTHAKTLTRAEQTYGVPREIILAIIGVETRYGDHM GNYRVVDALATLGYDYPPRGSFFRKQLKALFELEHHAHIDANTITGSYAGAMGYGQFIPTSYQAYAVDFDNDGITDLVNN PVDAIGSVANYFSEHNWQPGLPVAARARLHGTGYVALAKKGYKPSFTLAQANSAGVTALSCNDDRLVSEYCFDLPASTRV ALLDLTGTDGAEFWLATDNFYVITRYNHSRLYAMAVLQLSRQLAAALEDNQ
Sequences:
>Translated_371_residues MEIMKTGEPPLRRFYLGILNIFRSGTAYSAIAVAALFFTSLPALAEHTCPENNDYLQRKQVQALIAELVSQGQDEARLRE VLGSAQCQPQILKSIARPAERTHTWATYQKIFLQESRVQKGIEFAHTHAKTLTRAEQTYGVPREIILAIIGVETRYGDHM GNYRVVDALATLGYDYPPRGSFFRKQLKALFELEHHAHIDANTITGSYAGAMGYGQFIPTSYQAYAVDFDNDGITDLVNN PVDAIGSVANYFSEHNWQPGLPVAARARLHGTGYVALAKKGYKPSFTLAQANSAGVTALSCNDDRLVSEYCFDLPASTRV ALLDLTGTDGAEFWLATDNFYVITRYNHSRLYAMAVLQLSRQLAAALEDNQ >Mature_371_residues MEIMKTGEPPLRRFYLGILNIFRSGTAYSAIAVAALFFTSLPALAEHTCPENNDYLQRKQVQALIAELVSQGQDEARLRE VLGSAQCQPQILKSIARPAERTHTWATYQKIFLQESRVQKGIEFAHTHAKTLTRAEQTYGVPREIILAIIGVETRYGDHM GNYRVVDALATLGYDYPPRGSFFRKQLKALFELEHHAHIDANTITGSYAGAMGYGQFIPTSYQAYAVDFDNDGITDLVNN PVDAIGSVANYFSEHNWQPGLPVAARARLHGTGYVALAKKGYKPSFTLAQANSAGVTALSCNDDRLVSEYCFDLPASTRV ALLDLTGTDGAEFWLATDNFYVITRYNHSRLYAMAVLQLSRQLAAALEDNQ
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=323, Percent_Identity=39.3188854489164, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 41143; Mature: 41143
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIMKTGEPPLRRFYLGILNIFRSGTAYSAIAVAALFFTSLPALAEHTCPENNDYLQRKQ CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VQALIAELVSQGQDEARLREVLGSAQCQPQILKSIARPAERTHTWATYQKIFLQESRVQK HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH GIEFAHTHAKTLTRAEQTYGVPREIILAIIGVETRYGDHMGNYRVVDALATLGYDYPPRG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCC SFFRKQLKALFELEHHAHIDANTITGSYAGAMGYGQFIPTSYQAYAVDFDNDGITDLVNN HHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCC PVDAIGSVANYFSEHNWQPGLPVAARARLHGTGYVALAKKGYKPSFTLAQANSAGVTALS CHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCEEEEEECCCCCCCEEEEECCCCCEEEEE CNDDRLVSEYCFDLPASTRVALLDLTGTDGAEFWLATDNFYVITRYNHSRLYAMAVLQLS CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHH RQLAAALEDNQ HHHHHHHCCCC >Mature Secondary Structure MEIMKTGEPPLRRFYLGILNIFRSGTAYSAIAVAALFFTSLPALAEHTCPENNDYLQRKQ CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VQALIAELVSQGQDEARLREVLGSAQCQPQILKSIARPAERTHTWATYQKIFLQESRVQK HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH GIEFAHTHAKTLTRAEQTYGVPREIILAIIGVETRYGDHMGNYRVVDALATLGYDYPPRG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCC SFFRKQLKALFELEHHAHIDANTITGSYAGAMGYGQFIPTSYQAYAVDFDNDGITDLVNN HHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCC PVDAIGSVANYFSEHNWQPGLPVAARARLHGTGYVALAKKGYKPSFTLAQANSAGVTALS CHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCEEEEEECCCCCCCEEEEECCCCCEEEEE CNDDRLVSEYCFDLPASTRVALLDLTGTDGAEFWLATDNFYVITRYNHSRLYAMAVLQLS CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHH RQLAAALEDNQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]