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The map label for this gene is rlpB

Identifier: 110834809

GI number: 110834809

Start: 2228137

End: 2228631

Strand: Direct

Name: rlpB

Synonym: ABO_1948

Alternate gene names: NA

Gene position: 2228137-2228631 (Clockwise)

Preceding gene: 110834808

Following gene: 110834810

Centisome position: 71.41

GC content: 56.77

Gene sequence:

>495_bases
ATGAAGGTTATCGCCGCCATCACCACCGTACTCTTAACCCTGTTGGTTTCTGCCTGCGGCTGGCAACTGCGCGGCGAAAC
CAGCGTACCCTCCATGGAAAGCCTATCGCTCATGGGGGCAAGCACAGAGCTGAAATACAGCTTGGAAGATGAGCTGGAAA
ACCAAGGCGTACTAGTGCACAACGAGTCCCCCTATCAGCTGATCATTGATGACGAAGAGTGGATGCGCCGCACTTCCGCT
GTCGATAATCAGGGCCGCCAAGCGGAAATTGAACTGCGTTACACCCTTTACTGGCACCTGCGCGATGTAAAAACCGGCGC
CCTGCTCACCACCCCCAAACGCATGATGGCGCTGCGCAGCCTGCCCTGGTACCCGGAAAACGCCACCGCGTCCTCAGATG
AAGAGCAACTGGTGCGCGACGACTTGTACGAAGATATGACCTTCCGGCTGATCAACCAGATCGCTGCGGCCTCTAAGGGG
TGGGAGACCTACTAA

Upstream 100 bases:

>100_bases
GACGCGGACGCCCCGGCAAACACGGCTCCTAGCCGGCTCCTAGCCGGCTCCAGCCATCAGCTTGAAGACGCATAAGCGCC
ACTTGCCCCACGAGGTTTGC

Downstream 100 bases:

>100_bases
TGCGCCTGCGTCCCGAACAACTTGGCAAGCACCTGTCCGCGACGCTGTTGCCCGTTTATCTAGTTGCCGGTGACGAACCC
CTACAGCAAGGCGAACTCAT

Product: rare lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKVIAAITTVLLTLLVSACGWQLRGETSVPSMESLSLMGASTELKYSLEDELENQGVLVHNESPYQLIIDDEEWMRRTSA
VDNQGRQAEIELRYTLYWHLRDVKTGALLTTPKRMMALRSLPWYPENATASSDEEQLVRDDLYEDMTFRLINQIAAASKG
WETY

Sequences:

>Translated_164_residues
MKVIAAITTVLLTLLVSACGWQLRGETSVPSMESLSLMGASTELKYSLEDELENQGVLVHNESPYQLIIDDEEWMRRTSA
VDNQGRQAEIELRYTLYWHLRDVKTGALLTTPKRMMALRSLPWYPENATASSDEEQLVRDDLYEDMTFRLINQIAAASKG
WETY
>Mature_164_residues
MKVIAAITTVLLTLLVSACGWQLRGETSVPSMESLSLMGASTELKYSLEDELENQGVLVHNESPYQLIIDDEEWMRRTSA
VDNQGRQAEIELRYTLYWHLRDVKTGALLTTPKRMMALRSLPWYPENATASSDEEQLVRDDLYEDMTFRLINQIAAASKG
WETY

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18735; Mature: 18735

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIAAITTVLLTLLVSACGWQLRGETSVPSMESLSLMGASTELKYSLEDELENQGVLVH
CHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCEEEECHHHHHCCCCEEEE
NESPYQLIIDDEEWMRRTSAVDNQGRQAEIELRYTLYWHLRDVKTGALLTTPKRMMALRS
CCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCEEECHHHHHHHHC
LPWYPENATASSDEEQLVRDDLYEDMTFRLINQIAAASKGWETY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKVIAAITTVLLTLLVSACGWQLRGETSVPSMESLSLMGASTELKYSLEDELENQGVLVH
CHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCEEEECHHHHHCCCCEEEE
NESPYQLIIDDEEWMRRTSAVDNQGRQAEIELRYTLYWHLRDVKTGALLTTPKRMMALRS
CCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCEEECHHHHHHHHC
LPWYPENATASSDEEQLVRDDLYEDMTFRLINQIAAASKGWETY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA