Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834803

Identifier: 110834803

GI number: 110834803

Start: 2219470

End: 2220705

Strand: Direct

Name: 110834803

Synonym: ABO_1942

Alternate gene names: NA

Gene position: 2219470-2220705 (Clockwise)

Preceding gene: 110834802

Following gene: 110834804

Centisome position: 71.13

GC content: 60.28

Gene sequence:

>1236_bases
ATGCCCATGCCAGTTGATGACTCTGTCTGGGATGTGGTGATTGTGGGCGGCGGCGCTGCCGGCCTCGCGGCGGCGGCCAG
CCTGCTCAAACGCAAGCCCTCCCTATCGATAGCGATCGTAGAACCCAGCGATCGCCACTATTATCAACCCGCCTGGACCC
TGGTGGGCGGCGGCTGCTTCAACCCCGCAGATACCTGCCGCTCCACCGCTTCGCTAATACCGGCCAATGCCAAATGGATT
CGCAGCGAGGTGACGGGCTTCCTGCCGCAGCAGAACCAAGTCATTGTGGAAAATCACCAGCATCTGAGCTATCGCAGCTT
AGTGGTGGCCCCCGGCCTAGAACTGAACTGGGGAGCCATTGCCGGTCTTGAAGAGACCTTGGGCAAGAATGGCGTGACCA
GTAACTACCACTACGATCTCGCGCCCTACACCTGGGAATGCGTGCAATTGCTCAAGCAAGGCCGCGCCCTGTTTACTCAG
CCGGCCATGCCCATAAAGTGCGCCGGCGCCCCACAGAAGGCCATGTACCTGTCCTGCCATCACTGGGAGAAACAGGGCTA
CCTAGGCGACATTGACGTGCAGTTTCACAATGCTGGGGGCGTACTGTTCGGCGTTTCCAAGTTTGTGCCTCCGCTGATGG
AATACGTAAAGCGCTACGGCGCCAACCTGAATTTCACCAGCACCCTGATTGCCGTAGAGGGCCCAACGAAGACCGCCACC
TTCCGCGACACCGCTGAAGATGGCAGCACCATTGAGCGTACCGAATGCTTCGACATGCTTCATGTGGTGCCGCCACAACG
CGCCCCGGAATTCATCCGCGACAGCGAGCTTGCCAATGAAAGCGGCTGGGTCGCCGTCGATGAAGCCACCCTGCAACACC
CCCACTATGGCAATGTATTCAGCCTCGGGGATGTGTGTGGCGCCAGCAATGCCAAAACCGCTGCCGCGGTGCGTAAGCAG
GCGCCCGTGGTAGCAGAAAACCTGCTCGCCCACCTCGCCGACCGCCCCATGCCCGCCCGCTACACCGGATACGGCGCCTG
TCCGCTCACCGTGGAACAGGGCAAGGTGGTAATGGCCGAGTTCGGCTATGGCGGCAAACTGCAACCCACCTTCCCACTCA
AACCCGCGGTGGCTCGCACCAGCATGTGGTGGCTCAAGCGCTACGCCATGCCGCGCATCTATTTCTCCATGATGCTGAAA
GGGCACGAATGGCTGGCAAAACCAGGAAAACCATAA

Upstream 100 bases:

>100_bases
CTGCCATCGGTGCAGATCAACATGCGCGCCGGGCACCTTCCTCCCGAGGAAGACAATGGCATCAGCTACCTGAAAATCCC
CCTGAACGCACTCTAAGAGA

Downstream 100 bases:

>100_bases
GGCACTAAGGCGATGAGACTTCCTGGCTGGCTCGCAGCATCACAATGGCTCCCACTCTATAACCGGCAGACTGCCGCTCA
GGATGGGGTTGCCGCAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide Dehydrogenase Flavoprotein Subunit; Twin-Arginine Translocation Pathway Signal; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Flavoprotein Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPMPVDDSVWDVVIVGGGAAGLAAAASLLKRKPSLSIAIVEPSDRHYYQPAWTLVGGGCFNPADTCRSTASLIPANAKWI
RSEVTGFLPQQNQVIVENHQHLSYRSLVVAPGLELNWGAIAGLEETLGKNGVTSNYHYDLAPYTWECVQLLKQGRALFTQ
PAMPIKCAGAPQKAMYLSCHHWEKQGYLGDIDVQFHNAGGVLFGVSKFVPPLMEYVKRYGANLNFTSTLIAVEGPTKTAT
FRDTAEDGSTIERTECFDMLHVVPPQRAPEFIRDSELANESGWVAVDEATLQHPHYGNVFSLGDVCGASNAKTAAAVRKQ
APVVAENLLAHLADRPMPARYTGYGACPLTVEQGKVVMAEFGYGGKLQPTFPLKPAVARTSMWWLKRYAMPRIYFSMMLK
GHEWLAKPGKP

Sequences:

>Translated_411_residues
MPMPVDDSVWDVVIVGGGAAGLAAAASLLKRKPSLSIAIVEPSDRHYYQPAWTLVGGGCFNPADTCRSTASLIPANAKWI
RSEVTGFLPQQNQVIVENHQHLSYRSLVVAPGLELNWGAIAGLEETLGKNGVTSNYHYDLAPYTWECVQLLKQGRALFTQ
PAMPIKCAGAPQKAMYLSCHHWEKQGYLGDIDVQFHNAGGVLFGVSKFVPPLMEYVKRYGANLNFTSTLIAVEGPTKTAT
FRDTAEDGSTIERTECFDMLHVVPPQRAPEFIRDSELANESGWVAVDEATLQHPHYGNVFSLGDVCGASNAKTAAAVRKQ
APVVAENLLAHLADRPMPARYTGYGACPLTVEQGKVVMAEFGYGGKLQPTFPLKPAVARTSMWWLKRYAMPRIYFSMMLK
GHEWLAKPGKP
>Mature_410_residues
PMPVDDSVWDVVIVGGGAAGLAAAASLLKRKPSLSIAIVEPSDRHYYQPAWTLVGGGCFNPADTCRSTASLIPANAKWIR
SEVTGFLPQQNQVIVENHQHLSYRSLVVAPGLELNWGAIAGLEETLGKNGVTSNYHYDLAPYTWECVQLLKQGRALFTQP
AMPIKCAGAPQKAMYLSCHHWEKQGYLGDIDVQFHNAGGVLFGVSKFVPPLMEYVKRYGANLNFTSTLIAVEGPTKTATF
RDTAEDGSTIERTECFDMLHVVPPQRAPEFIRDSELANESGWVAVDEATLQHPHYGNVFSLGDVCGASNAKTAAAVRKQA
PVVAENLLAHLADRPMPARYTGYGACPLTVEQGKVVMAEFGYGGKLQPTFPLKPAVARTSMWWLKRYAMPRIYFSMMLKG
HEWLAKPGKP

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=393, Percent_Identity=37.1501272264631, Blast_Score=293, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI17539680, Length=428, Percent_Identity=30.8411214953271, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI115534373, Length=339, Percent_Identity=34.5132743362832, Blast_Score=194, Evalue=6e-50,
Organism=Drosophila melanogaster, GI24657386, Length=383, Percent_Identity=37.0757180156658, Blast_Score=272, Evalue=4e-73,
Organism=Drosophila melanogaster, GI24657391, Length=383, Percent_Identity=37.0757180156658, Blast_Score=272, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44950; Mature: 44819

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMPVDDSVWDVVIVGGGAAGLAAAASLLKRKPSLSIAIVEPSDRHYYQPAWTLVGGGCF
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCEEEECCCCC
NPADTCRSTASLIPANAKWIRSEVTGFLPQQNQVIVENHQHLSYRSLVVAPGLELNWGAI
CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCEECCHHH
AGLEETLGKNGVTSNYHYDLAPYTWECVQLLKQGRALFTQPAMPIKCAGAPQKAMYLSCH
CCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEE
HWEKQGYLGDIDVQFHNAGGVLFGVSKFVPPLMEYVKRYGANLNFTSTLIAVEGPTKTAT
ECCCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCE
FRDTAEDGSTIERTECFDMLHVVPPQRAPEFIRDSELANESGWVAVDEATLQHPHYGNVF
ECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECHHHHCCCCCCCEE
SLGDVCGASNAKTAAAVRKQAPVVAENLLAHLADRPMPARYTGYGACPLTVEQGKVVMAE
EHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEE
FGYGGKLQPTFPLKPAVARTSMWWLKRYAMPRIYFSMMLKGHEWLAKPGKP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
PMPVDDSVWDVVIVGGGAAGLAAAASLLKRKPSLSIAIVEPSDRHYYQPAWTLVGGGCF
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCEEEECCCCC
NPADTCRSTASLIPANAKWIRSEVTGFLPQQNQVIVENHQHLSYRSLVVAPGLELNWGAI
CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCEECCHHH
AGLEETLGKNGVTSNYHYDLAPYTWECVQLLKQGRALFTQPAMPIKCAGAPQKAMYLSCH
CCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEE
HWEKQGYLGDIDVQFHNAGGVLFGVSKFVPPLMEYVKRYGANLNFTSTLIAVEGPTKTAT
ECCCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCE
FRDTAEDGSTIERTECFDMLHVVPPQRAPEFIRDSELANESGWVAVDEATLQHPHYGNVF
ECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECHHHHCCCCCCCEE
SLGDVCGASNAKTAAAVRKQAPVVAENLLAHLADRPMPARYTGYGACPLTVEQGKVVMAE
EHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEE
FGYGGKLQPTFPLKPAVARTSMWWLKRYAMPRIYFSMMLKGHEWLAKPGKP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA