Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834793

Identifier: 110834793

GI number: 110834793

Start: 2208495

End: 2208947

Strand: Reverse

Name: 110834793

Synonym: ABO_1932

Alternate gene names: NA

Gene position: 2208947-2208495 (Counterclockwise)

Preceding gene: 110834794

Following gene: 110834792

Centisome position: 70.8

GC content: 54.75

Gene sequence:

>453_bases
ATGTTGAATCACTTTTATAAAAAAACGTGCCAGGGGGCTGCCCTAGCAGCATTTCTGTGCTCTGGCATCGTCCATGCCGA
TGTGAGTATTTCAGAGGGGTGGCTGAGGGCTGTGCCACCGGTATCGCCGACCATGGCCGGCTACCTAACCGTGACGAATA
ACGGCGCGTTCAGCGTAAAAATCATTGGTGCCAGCAGTGAAGTCGCGGGTCACACCATGCTGCATAGCATGAAAACCCTG
AAGGATGGCACTCGTAAAATGGGGCATTTGCACCACATCATGTTGGAACCGGGGGAATCTTTCTCGTTATCACCGGGCGG
CGACCATTTGATGCTAATGAAACTTCGGCGAGTGCCCCAGCCTGGGGAATCGGTCACGGTTTGTCTGATGCCGGAGGAAG
GGGATGAGATCTGCGCCAACCTGCCGGTGTTGCGTGAGGCTCCCGAGGTTTAA

Upstream 100 bases:

>100_bases
TACCTGTTTACCCACAGCGACTACATATACCTGCTGGATGAACAGGCGCGTGTGCGCAAACTGTACCCGGCGGATTTCAA
GATTGACGAGGTGGTAACGG

Downstream 100 bases:

>100_bases
ACGAGCCTACACAAACTTGCGTTTGCGCCTCTTCTGCGCAATGGATAGCGCGCATACACTATAAATATGCGTCTGTTAAT
CCTGATTATACTCATCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL
KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV

Sequences:

>Translated_150_residues
MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL
KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV
>Mature_150_residues
MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL
KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16108; Mature: 16108

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVK
CCCCHHHHHCCHHHHHHHHHHCHHCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEE
IIGASSEVAGHTMLHSMKTLKDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQ
EECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCEEEEEEHHCCCC
PGESVTVCLMPEEGDEICANLPVLREAPEV
CCCCEEEEEECCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVK
CCCCHHHHHCCHHHHHHHHHHCHHCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEE
IIGASSEVAGHTMLHSMKTLKDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQ
EECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCEEEEEEHHCCCC
PGESVTVCLMPEEGDEICANLPVLREAPEV
CCCCEEEEEECCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA