| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is phoH1 [H]
Identifier: 110834785
GI number: 110834785
Start: 2201527
End: 2202993
Strand: Reverse
Name: phoH1 [H]
Synonym: ABO_1924
Alternate gene names: 110834785
Gene position: 2202993-2201527 (Counterclockwise)
Preceding gene: 110834786
Following gene: 110834783
Centisome position: 70.61
GC content: 51.6
Gene sequence:
>1467_bases ATGGAAGAGCGCGCGGCCAGACTCCACACCCTTTCCGTTAACCACGCAAGCGCTAGCCAGAACGACAGTTCTACCTTCGA AGAAGACCAGAAAAAAACCTACGTCATTGATACCAATGTATTGATTCACGACCCTAACTCGTTACTCAATTTCGAGGAAC ATCGGGTGGTGATTCCTATGACGGTGCTGGAGGAACTGGATAAGCTAAAGAGTGGAAAATCACATACGGCAGCGGATTGT CGTGCCGCCATTCGGCAGATCGACAAGGTGCTGGGCAGCGCTAGCCCCGAGCAAGTGGAAGAAGGGATTCCCATACCCCG TGGTGGCGAGAATGAGCCTCAAGGCACATTGACGGTTTTGATGGCCGAGCGGAACAAAGTCACCGCGCCGCTCACCAATG ATCTGAATGACAACCGCATCATCAATGACGTGGTGGCCATGAAGAGTCAGTTTCCAGACCGACGCTATATTCTGGTGACC AAGGACATCAACATGCGCCTCAAAGCGCGTGCCTGCGGTATCGAGTCAGAGGATTATCACAACGATCAACTGGTGTCGGA CATTAAGCAACTGACGCGAGGCTATTTCGAAGTGCCCGGTTCATTTTGGGATCAGGTTACCGAGGTGGAAACCGAACAGG TGGGCATTGATACCCTTCATCATTTGTCGCATGGCTTACTGGTTAGTGAAATTCTTGGCGAAGAGGTGTACCCCAATCAG TACATCATCGACGAACAGGGTTTTGTCGGCCGGGTGATGACGGTGGAAAATGGCGTGGTGACGCTTTGTCATTACAAGGC GGATAGCCTGATGGAGCAAGAAGCCTGGGGCCTGAAGCCGATGAACATTCAGCAGGCCATCGCCTTGCAAATGCTGCTGG ATCCGGATGTGCATATTGTCACGCTCACCGGGGCGGCAGGCTCCGGTAAAACTATTCTGGCACTGGCGGCAGCCATTGAA ATGACCGTGGAGCAAAAAAGCTTCAACAAAATTATTGCAACCCGTTCCACTCCACCGCTAGCGGAAGATCAAGGTTTTCT TCCTGGTACGGAAGAGGAAAAAATGGACCCTTGGCTGGGCGCTATCAATGACAATATTGAGGCACTGCATCTTAACGATG AAAATCCTTCCGGCAGCATTCAGTATGTGAAGGAACGCGCCAATATTCAGTTTAAGGCGATGAATTATATTCGTGGGCGA AGTTTCCAGAAATCGCTGATCTTGATCGATGAAAGCCAGAACCTGACTCCTCATCAGATGAAAGCGATCATTACCCGGGC GGGGGAGGGCTCGAAGGTGGTGTGTTTGGGCAATCTGGCGCAGATCGATACGCCCTACCTGTCGCCCACCAGCTCAGGGC TAACTTACATGACTGAGCGTTTTAAACGTTTCGTGCATGGGGGGTCGGTGCAATTGAACGGGGTGCCGCGGTCGCTGTTG GCAGAATATGCAGAATCGTTTTTGTAA
Upstream 100 bases:
>100_bases CAATTGGCTTAAACCACGGCGGCAGGCGCAGGCGTCACTCTCGCTTCTTGAAATTGACGTCCACGCTAAATGTCGCCCCA TCGAAGCACAGGGGATACGC
Downstream 100 bases:
>100_bases TCGTTGGCGGTGGATAGTGAATAGCTAAAAACCTCCGCGGTTGTGTTGTGCCCCTTCAGAAACAAACAGGCCGCGCCTAA GCTTTAGGCGCGGCCTCTTG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MEERAARLHTLSVNHASASQNDSSTFEEDQKKTYVIDTNVLIHDPNSLLNFEEHRVVIPMTVLEELDKLKSGKSHTAADC RAAIRQIDKVLGSASPEQVEEGIPIPRGGENEPQGTLTVLMAERNKVTAPLTNDLNDNRIINDVVAMKSQFPDRRYILVT KDINMRLKARACGIESEDYHNDQLVSDIKQLTRGYFEVPGSFWDQVTEVETEQVGIDTLHHLSHGLLVSEILGEEVYPNQ YIIDEQGFVGRVMTVENGVVTLCHYKADSLMEQEAWGLKPMNIQQAIALQMLLDPDVHIVTLTGAAGSGKTILALAAAIE MTVEQKSFNKIIATRSTPPLAEDQGFLPGTEEEKMDPWLGAINDNIEALHLNDENPSGSIQYVKERANIQFKAMNYIRGR SFQKSLILIDESQNLTPHQMKAIITRAGEGSKVVCLGNLAQIDTPYLSPTSSGLTYMTERFKRFVHGGSVQLNGVPRSLL AEYAESFL
Sequences:
>Translated_488_residues MEERAARLHTLSVNHASASQNDSSTFEEDQKKTYVIDTNVLIHDPNSLLNFEEHRVVIPMTVLEELDKLKSGKSHTAADC RAAIRQIDKVLGSASPEQVEEGIPIPRGGENEPQGTLTVLMAERNKVTAPLTNDLNDNRIINDVVAMKSQFPDRRYILVT KDINMRLKARACGIESEDYHNDQLVSDIKQLTRGYFEVPGSFWDQVTEVETEQVGIDTLHHLSHGLLVSEILGEEVYPNQ YIIDEQGFVGRVMTVENGVVTLCHYKADSLMEQEAWGLKPMNIQQAIALQMLLDPDVHIVTLTGAAGSGKTILALAAAIE MTVEQKSFNKIIATRSTPPLAEDQGFLPGTEEEKMDPWLGAINDNIEALHLNDENPSGSIQYVKERANIQFKAMNYIRGR SFQKSLILIDESQNLTPHQMKAIITRAGEGSKVVCLGNLAQIDTPYLSPTSSGLTYMTERFKRFVHGGSVQLNGVPRSLL AEYAESFL >Mature_488_residues MEERAARLHTLSVNHASASQNDSSTFEEDQKKTYVIDTNVLIHDPNSLLNFEEHRVVIPMTVLEELDKLKSGKSHTAADC RAAIRQIDKVLGSASPEQVEEGIPIPRGGENEPQGTLTVLMAERNKVTAPLTNDLNDNRIINDVVAMKSQFPDRRYILVT KDINMRLKARACGIESEDYHNDQLVSDIKQLTRGYFEVPGSFWDQVTEVETEQVGIDTLHHLSHGLLVSEILGEEVYPNQ YIIDEQGFVGRVMTVENGVVTLCHYKADSLMEQEAWGLKPMNIQQAIALQMLLDPDVHIVTLTGAAGSGKTILALAAAIE MTVEQKSFNKIIATRSTPPLAEDQGFLPGTEEEKMDPWLGAINDNIEALHLNDENPSGSIQYVKERANIQFKAMNYIRGR SFQKSLILIDESQNLTPHQMKAIITRAGEGSKVVCLGNLAQIDTPYLSPTSSGLTYMTERFKRFVHGGSVQLNGVPRSLL AEYAESFL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=167, Percent_Identity=34.7305389221557, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI145693103, Length=183, Percent_Identity=36.0655737704918, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 54225; Mature: 54225
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERAARLHTLSVNHASASQNDSSTFEEDQKKTYVIDTNVLIHDPNSLLNFEEHRVVIPM CCCHHCEEEEEEECCCCCCCCCCCCHHHCCCEEEEEEEEEEEECCHHHCCCCCCEEEEEH TVLEELDKLKSGKSHTAADCRAAIRQIDKVLGSASPEQVEEGIPIPRGGENEPQGTLTVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEE MAERNKVTAPLTNDLNDNRIINDVVAMKSQFPDRRYILVTKDINMRLKARACGIESEDYH EECCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCC NDQLVSDIKQLTRGYFEVPGSFWDQVTEVETEQVGIDTLHHLSHGLLVSEILGEEVYPNQ CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC YIIDEQGFVGRVMTVENGVVTLCHYKADSLMEQEAWGLKPMNIQQAIALQMLLDPDVHIV EEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE TLTGAAGSGKTILALAAAIEMTVEQKSFNKIIATRSTPPLAEDQGFLPGTEEEKMDPWLG EEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHCCCHHH AINDNIEALHLNDENPSGSIQYVKERANIQFKAMNYIRGRSFQKSLILIDESQNLTPHQM HCCCCEEEEEECCCCCCCCHHHHHHHCCEEEEEEHHHHCCCCCCEEEEEECCCCCCHHHH KAIITRAGEGSKVVCLGNLAQIDTPYLSPTSSGLTYMTERFKRFVHGGSVQLNGVPRSLL HHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHH AEYAESFL HHHHHHCC >Mature Secondary Structure MEERAARLHTLSVNHASASQNDSSTFEEDQKKTYVIDTNVLIHDPNSLLNFEEHRVVIPM CCCHHCEEEEEEECCCCCCCCCCCCHHHCCCEEEEEEEEEEEECCHHHCCCCCCEEEEEH TVLEELDKLKSGKSHTAADCRAAIRQIDKVLGSASPEQVEEGIPIPRGGENEPQGTLTVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEE MAERNKVTAPLTNDLNDNRIINDVVAMKSQFPDRRYILVTKDINMRLKARACGIESEDYH EECCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCC NDQLVSDIKQLTRGYFEVPGSFWDQVTEVETEQVGIDTLHHLSHGLLVSEILGEEVYPNQ CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC YIIDEQGFVGRVMTVENGVVTLCHYKADSLMEQEAWGLKPMNIQQAIALQMLLDPDVHIV EEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE TLTGAAGSGKTILALAAAIEMTVEQKSFNKIIATRSTPPLAEDQGFLPGTEEEKMDPWLG EEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHCCCHHH AINDNIEALHLNDENPSGSIQYVKERANIQFKAMNYIRGRSFQKSLILIDESQNLTPHQM HCCCCEEEEEECCCCCCCCHHHHHHHCCEEEEEEHHHHCCCCCCEEEEEECCCCCCHHHH KAIITRAGEGSKVVCLGNLAQIDTPYLSPTSSGLTYMTERFKRFVHGGSVQLNGVPRSLL HHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHH AEYAESFL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]