| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is coxC [H]
Identifier: 110834758
GI number: 110834758
Start: 2174518
End: 2175399
Strand: Reverse
Name: coxC [H]
Synonym: ABO_1897
Alternate gene names: 110834758
Gene position: 2175399-2174518 (Counterclockwise)
Preceding gene: 110834759
Following gene: 110834754
Centisome position: 69.72
GC content: 52.95
Gene sequence:
>882_bases ATGGCTACTGAAAAATACTACGTTCCAGAGAGCAGCCCTTGGCCGTTGACGGCTTCCATAGGTTTGTTCATGACCGCTAT CGGCGGTGCGCATTTTATTCAGCAGAGCACCATGGCGGATATGGAGCCTAGCTTCATTGGTAAACCGCTATTCTTCCTAG GCCTGACCTGGTTGCTGGTAGTGATCGCCCTGTGGTGGCGTGACACTATTAAGGAGTCCGTCGGTGGCCTGCACAGCAAT CAGTTGGGCGGTTCCTACCGTCAGGGCATGCTGTGGTTTATCTTTTCTGAGGTAATGTTCTTTGCGGCCTTCTTTGGCGC TATGTTCTACACCCGTTGGCTGATCCTGCCTTGGTTGTCTGGGGAAGGCAGCAACGCCATGACCCACGAACTGCTATGGC CGAACTTTCAAGCCATGTGGCCGCTGACTGTGACCCCTGCGGGTGATACCACACAAGCCATGGGCGCATGGGGCTTGCCA GCGATCAACACGGCTATCCTGTTGGTGTCCTCTGTAACCCTGACAATCGCTCACCACGCCTTGTTAGAAGGCAAGCGTGG CACTGTGATTGCCTTCCAGGCGGCTACAGTGATCCTCGGTGTGATCTTCCTGTTCTTGCAGGTGGAAGAATATATTCATG CTTATACCGAGCTCGGATTGACGTTGGATGCGGGTATCTACGGCAGCCTGTTCTTCCTGCTCACTGGGTTCCATGGTGCG CACGTAACCATCGGTACCATCTTCTTATTCGTGACCTTGCTGCGTGTGATCAAGGGCCACTTTGATGAAGAGAATAACTT TGCCTGGGAAGCCGGTGCCTGGTATTGGCACTTTGTGGACGTGGTGTGGTTGTTCTTGTTTATTACGGTGTATTGGTTGT AA
Upstream 100 bases:
>100_bases ACTCTGTCATACACGATCTTCGATGTGACAGAGCGGGTCGCCGGTAAAAACAACAGCGTGGCTGTGAACTAGAACAGCCG GTTGTAGAGGAGATTTTTTA
Downstream 100 bases:
>100_bases TCGGCGGCGCTGCACGCGCCACGCGATAAGTAACACGTAAAAAGCCGCGCTTCGAAAGAAGCGCGGCTTTTTTGTTTGAA AGTTTAATGCTGTATTCAGG
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MATEKYYVPESSPWPLTASIGLFMTAIGGAHFIQQSTMADMEPSFIGKPLFFLGLTWLLVVIALWWRDTIKESVGGLHSN QLGGSYRQGMLWFIFSEVMFFAAFFGAMFYTRWLILPWLSGEGSNAMTHELLWPNFQAMWPLTVTPAGDTTQAMGAWGLP AINTAILLVSSVTLTIAHHALLEGKRGTVIAFQAATVILGVIFLFLQVEEYIHAYTELGLTLDAGIYGSLFFLLTGFHGA HVTIGTIFLFVTLLRVIKGHFDEENNFAWEAGAWYWHFVDVVWLFLFITVYWL
Sequences:
>Translated_293_residues MATEKYYVPESSPWPLTASIGLFMTAIGGAHFIQQSTMADMEPSFIGKPLFFLGLTWLLVVIALWWRDTIKESVGGLHSN QLGGSYRQGMLWFIFSEVMFFAAFFGAMFYTRWLILPWLSGEGSNAMTHELLWPNFQAMWPLTVTPAGDTTQAMGAWGLP AINTAILLVSSVTLTIAHHALLEGKRGTVIAFQAATVILGVIFLFLQVEEYIHAYTELGLTLDAGIYGSLFFLLTGFHGA HVTIGTIFLFVTLLRVIKGHFDEENNFAWEAGAWYWHFVDVVWLFLFITVYWL >Mature_292_residues ATEKYYVPESSPWPLTASIGLFMTAIGGAHFIQQSTMADMEPSFIGKPLFFLGLTWLLVVIALWWRDTIKESVGGLHSNQ LGGSYRQGMLWFIFSEVMFFAAFFGAMFYTRWLILPWLSGEGSNAMTHELLWPNFQAMWPLTVTPAGDTTQAMGAWGLPA INTAILLVSSVTLTIAHHALLEGKRGTVIAFQAATVILGVIFLFLQVEEYIHAYTELGLTLDAGIYGSLFFLLTGFHGAH VTIGTIFLFVTLLRVIKGHFDEENNFAWEAGAWYWHFVDVVWLFLFITVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=291, Percent_Identity=37.4570446735395, Blast_Score=157, Evalue=8e-39, Organism=Escherichia coli, GI1786633, Length=147, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6226542, Length=291, Percent_Identity=30.9278350515464, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32943; Mature: 32812
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEKYYVPESSPWPLTASIGLFMTAIGGAHFIQQSTMADMEPSFIGKPLFFLGLTWLLV CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHH VIALWWRDTIKESVGGLHSNQLGGSYRQGMLWFIFSEVMFFAAFFGAMFYTRWLILPWLS HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC GEGSNAMTHELLWPNFQAMWPLTVTPAGDTTQAMGAWGLPAINTAILLVSSVTLTIAHHA CCCCCCCCHHHCCCCCCEECCEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLEGKRGTVIAFQAATVILGVIFLFLQVEEYIHAYTELGLTLDAGIYGSLFFLLTGFHGA HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCC HVTIGTIFLFVTLLRVIKGHFDEENNFAWEAGAWYWHFVDVVWLFLFITVYWL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATEKYYVPESSPWPLTASIGLFMTAIGGAHFIQQSTMADMEPSFIGKPLFFLGLTWLLV CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHH VIALWWRDTIKESVGGLHSNQLGGSYRQGMLWFIFSEVMFFAAFFGAMFYTRWLILPWLS HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC GEGSNAMTHELLWPNFQAMWPLTVTPAGDTTQAMGAWGLPAINTAILLVSSVTLTIAHHA CCCCCCCCHHHCCCCCCEECCEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLEGKRGTVIAFQAATVILGVIFLFLQVEEYIHAYTELGLTLDAGIYGSLFFLLTGFHGA HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCC HVTIGTIFLFVTLLRVIKGHFDEENNFAWEAGAWYWHFVDVVWLFLFITVYWL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]