| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834754
Identifier: 110834754
GI number: 110834754
Start: 2169751
End: 2170023
Strand: Reverse
Name: 110834754
Synonym: ABO_1893
Alternate gene names: NA
Gene position: 2170023-2169751 (Counterclockwise)
Preceding gene: 110834758
Following gene: 110834744
Centisome position: 69.55
GC content: 48.72
Gene sequence:
>273_bases TTGGGCGGCGGTATTTATGTTGGCCAATCGAAAACGGGCAAGCAAAATTTGCGGTATGCTCTAGCGACGATTGGATCTCA CGGTGATGAGCGAATGGGCGATATTCTGCCGTTCAAGAAACCGCAAAAGAAAACGCCGAATAGAGGCATGTGCCAGCACG GGTTCCACAGGTGGTTGATCTGTAAGGAAAAGCAGTTTGATGTGAAGCAAGGAAAACTGGTGACGGTATACCGTTGTGAG CGCTGCGGAAAAGAAAAAGTGAAGACGCACTAA
Upstream 100 bases:
>100_bases ATACGGGTTTGTACGCCCCCCTTCGATGGGTGAATCCGATTTCATGGGCAACGGTACAGCCATGAGCCTAACGATCGACT GATCGGGGGTTTGTTGCCCG
Downstream 100 bases:
>100_bases TCGGGTAAATGTGCATGCTTGAAATGCGATCTAGCTGTGAAATATGTCAGTGCACCTTGGCCGCCGATGAGCAAGCGTAT ATTTGCTCCTACGAATGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGGGIYVGQSKTGKQNLRYALATIGSHGDERMGDILPFKKPQKKTPNRGMCQHGFHRWLICKEKQFDVKQGKLVTVYRCE RCGKEKVKTH
Sequences:
>Translated_90_residues MGGGIYVGQSKTGKQNLRYALATIGSHGDERMGDILPFKKPQKKTPNRGMCQHGFHRWLICKEKQFDVKQGKLVTVYRCE RCGKEKVKTH >Mature_89_residues GGGIYVGQSKTGKQNLRYALATIGSHGDERMGDILPFKKPQKKTPNRGMCQHGFHRWLICKEKQFDVKQGKLVTVYRCER CGKEKVKTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10264; Mature: 10133
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGIYVGQSKTGKQNLRYALATIGSHGDERMGDILPFKKPQKKTPNRGMCQHGFHRWLI CCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE CKEKQFDVKQGKLVTVYRCERCGKEKVKTH ECCCCCCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure GGGIYVGQSKTGKQNLRYALATIGSHGDERMGDILPFKKPQKKTPNRGMCQHGFHRWLI CCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE CKEKQFDVKQGKLVTVYRCERCGKEKVKTH ECCCCCCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA