Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is ubiG [H]

Identifier: 110834614

GI number: 110834614

Start: 1999555

End: 2000313

Strand: Direct

Name: ubiG [H]

Synonym: ABO_1753

Alternate gene names: 110834614

Gene position: 1999555-2000313 (Clockwise)

Preceding gene: 110834613

Following gene: 110834615

Centisome position: 64.09

GC content: 60.21

Gene sequence:

>759_bases
ATGCCAAGCAGTGGCAAGAAAAAATCGCCGGAGCCGACCGTGACTGAACAGCAAACCCACACCCCGAACGTAGACGCCGG
CGAAATCGCCAAGTTCAACGCCCTGGCTGAGCAGTGGTGGGACCCCAATTCCCAATTCCGCCCGCTGCACGACATTAATC
CGTTGCGCCTGAACTATATCGACGAGCGCGTCAGCCTGCCGAGCAAAAAAGTCATTGATATCGGCTGCGGTGGCGGCCTG
CTTTCCGAAGGCATGGCCCGACGCGGCGCAGAAGTAACCGGCATCGACATGGGCGAAGCCCCGCTGGCGGTCGCCCGCAT
TCACGCAGAACACGCCGGCGTAGCGGTGGAATACCTGCAAATCCCGGCGGAACAGATCGCCGAACAGCGCGCCGGCCAGT
ATGACGTGGTCACCTGCCTGGAAATGCTCGAACACGTACCGGATCCCTCCTCGGTGATTCGCGCCTGCGCCACCCTGGTG
AAACCCGGCGGGCAAGTCTTTTTCAGCACCATCAACCGCAATCCCAAGGCGTTCATGTTTGCCATTGTCGGCGCGGAATA
TGTGCTGCGCCTGCTACCGCGCGGCACCCACGAATACGCCAAACTGATTAAACCCTCCGAGCTGGCTGGCTGGGCCCGCG
ATGCGGGGCTGGATGTACAAGACACCGCCGGGATGGTTTATAACCCGCTCACCCAGGTTTACAAACTGAATCGGGATGTA
TCGGTGAATTACTTGATGCACGCCCGCAAGGGCGACTGA

Upstream 100 bases:

>100_bases
GCTGCCACCCGCGACCAGATCACCCACACATGGGTGGGCGGGCGCTGCCTGATGGATAACCGCCAGCTAACCACACTCAA
CGAAGCCCTGATCCTCAAGA

Downstream 100 bases:

>100_bases
TTGCCTGCGGGAGCCAATAATGGAACGCCTTGAAGCCGTTTATTTCGATTTGGATGGCACCCTTATCGATACCGCCCCGG
ACTTTTATACGGTACTCAAT

Product: 3-demethylubiquinone-9 3-O-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGL
LSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLV
KPGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV
SVNYLMHARKGD

Sequences:

>Translated_252_residues
MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGL
LSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLV
KPGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV
SVNYLMHARKGD
>Mature_251_residues
PSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGLL
SEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVK
PGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDVS
VNYLMHARKGD

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

Organism=Homo sapiens, GI118600965, Length=246, Percent_Identity=34.9593495934959, Blast_Score=172, Evalue=2e-43,
Organism=Escherichia coli, GI1788564, Length=228, Percent_Identity=58.7719298245614, Blast_Score=293, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI115533050, Length=247, Percent_Identity=33.1983805668016, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324476, Length=265, Percent_Identity=30.188679245283, Blast_Score=128, Evalue=9e-31,
Organism=Drosophila melanogaster, GI281365311, Length=258, Percent_Identity=29.8449612403101, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24585589, Length=213, Percent_Identity=33.8028169014084, Blast_Score=132, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 27646; Mature: 27515

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH
DERVSLPSKKVIDIGCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQ
HHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHH
IPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMF
CCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHH
AIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV
HHHHHHHHHHHHCCCHHHHHHHCCCHHHHCHHHHCCCCHHHCCCHHHHHHHHHHHCCCCC
SVNYLMHARKGD
EEEEEEEECCCC
>Mature Secondary Structure 
PSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH
DERVSLPSKKVIDIGCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQ
HHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHH
IPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMF
CCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHH
AIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV
HHHHHHHHHHHHCCCHHHHHHHCCCHHHHCHHHHCCCCHHHCCCHHHHHHHHHHHCCCCC
SVNYLMHARKGD
EEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA