| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ubiG [H]
Identifier: 110834614
GI number: 110834614
Start: 1999555
End: 2000313
Strand: Direct
Name: ubiG [H]
Synonym: ABO_1753
Alternate gene names: 110834614
Gene position: 1999555-2000313 (Clockwise)
Preceding gene: 110834613
Following gene: 110834615
Centisome position: 64.09
GC content: 60.21
Gene sequence:
>759_bases ATGCCAAGCAGTGGCAAGAAAAAATCGCCGGAGCCGACCGTGACTGAACAGCAAACCCACACCCCGAACGTAGACGCCGG CGAAATCGCCAAGTTCAACGCCCTGGCTGAGCAGTGGTGGGACCCCAATTCCCAATTCCGCCCGCTGCACGACATTAATC CGTTGCGCCTGAACTATATCGACGAGCGCGTCAGCCTGCCGAGCAAAAAAGTCATTGATATCGGCTGCGGTGGCGGCCTG CTTTCCGAAGGCATGGCCCGACGCGGCGCAGAAGTAACCGGCATCGACATGGGCGAAGCCCCGCTGGCGGTCGCCCGCAT TCACGCAGAACACGCCGGCGTAGCGGTGGAATACCTGCAAATCCCGGCGGAACAGATCGCCGAACAGCGCGCCGGCCAGT ATGACGTGGTCACCTGCCTGGAAATGCTCGAACACGTACCGGATCCCTCCTCGGTGATTCGCGCCTGCGCCACCCTGGTG AAACCCGGCGGGCAAGTCTTTTTCAGCACCATCAACCGCAATCCCAAGGCGTTCATGTTTGCCATTGTCGGCGCGGAATA TGTGCTGCGCCTGCTACCGCGCGGCACCCACGAATACGCCAAACTGATTAAACCCTCCGAGCTGGCTGGCTGGGCCCGCG ATGCGGGGCTGGATGTACAAGACACCGCCGGGATGGTTTATAACCCGCTCACCCAGGTTTACAAACTGAATCGGGATGTA TCGGTGAATTACTTGATGCACGCCCGCAAGGGCGACTGA
Upstream 100 bases:
>100_bases GCTGCCACCCGCGACCAGATCACCCACACATGGGTGGGCGGGCGCTGCCTGATGGATAACCGCCAGCTAACCACACTCAA CGAAGCCCTGATCCTCAAGA
Downstream 100 bases:
>100_bases TTGCCTGCGGGAGCCAATAATGGAACGCCTTGAAGCCGTTTATTTCGATTTGGATGGCACCCTTATCGATACCGCCCCGG ACTTTTATACGGTACTCAAT
Product: 3-demethylubiquinone-9 3-O-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGL LSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLV KPGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV SVNYLMHARKGD
Sequences:
>Translated_252_residues MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGL LSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLV KPGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV SVNYLMHARKGD >Mature_251_residues PSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKKVIDIGCGGGLL SEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQIPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVK PGGQVFFSTINRNPKAFMFAIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDVS VNYLMHARKGD
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=246, Percent_Identity=34.9593495934959, Blast_Score=172, Evalue=2e-43, Organism=Escherichia coli, GI1788564, Length=228, Percent_Identity=58.7719298245614, Blast_Score=293, Evalue=1e-80, Organism=Caenorhabditis elegans, GI115533050, Length=247, Percent_Identity=33.1983805668016, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324476, Length=265, Percent_Identity=30.188679245283, Blast_Score=128, Evalue=9e-31, Organism=Drosophila melanogaster, GI281365311, Length=258, Percent_Identity=29.8449612403101, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24585589, Length=213, Percent_Identity=33.8028169014084, Blast_Score=132, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 27646; Mature: 27515
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH DERVSLPSKKVIDIGCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQ HHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHH IPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMF CCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHH AIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV HHHHHHHHHHHHCCCHHHHHHHCCCHHHHCHHHHCCCCHHHCCCHHHHHHHHHHHCCCCC SVNYLMHARKGD EEEEEEEECCCC >Mature Secondary Structure PSSGKKKSPEPTVTEQQTHTPNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYI CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH DERVSLPSKKVIDIGCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEHAGVAVEYLQ HHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHH IPAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMF CCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHH AIVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDV HHHHHHHHHHHHCCCHHHHHHHCCCHHHHCHHHHCCCCHHHCCCHHHHHHHHHHHCCCCC SVNYLMHARKGD EEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA