| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ptxB [H]
Identifier: 110834582
GI number: 110834582
Start: 1959397
End: 1960263
Strand: Direct
Name: ptxB [H]
Synonym: ABO_1721
Alternate gene names: 110834582
Gene position: 1959397-1960263 (Clockwise)
Preceding gene: 110834581
Following gene: 110834583
Centisome position: 62.8
GC content: 56.63
Gene sequence:
>867_bases ATGCGTTTGAAACTTCTTGTTGCACTGGTTGCTGCCCTGCTGCTCTCTGCCTGCAATGACCCCCACACCGGCACCTTCAT CTTTACCGCCATCCCCGACCAGGATGAGTCTCAGCTGGAAAAACGGTTCGGCACCATCGCCCTTTATCTGGAAGACCAAC TGGGCGTACCGGTGAAATACGTTCCGGTGAAATCCTACGCTGCCGCCGTTACCGCCTTTCGCAACGATGAGGTACAAATG GCCTGGTTTGGCGGTTTATCCGGTGTTCAGGCTCGTCGTCTTGTCCCCGGCTCCCAGGCCATTGCACAGGGCCAGGAAGA CACTGCCTTCAAGTCTTACTTCATCGCCAACAGCAGCACCGGGCTCAAGCCTGTAGAGACACTGGGTGAAGACTTCATTG CACAACCGTCATTTACCTTCGGTTCCAAAGGCAGCACCTCGGGCCGCCTGATGCCGGAATTCTATCTGCGCGATACGTTC AATGAAGCGCCGGACACGCTGTTCGAAAAAGTCGGTTTCTCCGGCGACCACAGCCGCACCATTGCACTGGTACAAAGCGG CGCCTACGCCACTGGCGCGGTGAACTTCAAGGTTTGGGAGCGTGAGCTGGCGGAAGGCAAAATTGACACCAGCAAAGTCA GTGTCATCTGGGAAACTCCCAGCTACCCCGACTACCACTGGACAGTACGTGGTGATCTGAATGAGCGTTTTGGCGACGGC TTTAGCCAGCGCGTTACCGAGGTATTACTGGCCATCGACGATCCGGTGCTGCTGAAAGCGTTCCCCCGTGAGAAGTTTGT ACCCGCGTCCAATGCGGACTACGCCCCCATCGAGGAAACCGCCAGCGCCATTGGTCTGTTGGACTAA
Upstream 100 bases:
>100_bases AACAGTCGCTGAGCAATATCACCGGCAGGCCGCTATACTGCATAAGCGTTCCTTGCCGAATCCAACATTCCTTAAGCCTC CCTATTGAACGGAGACAACG
Downstream 100 bases:
>100_bases CGGCCACGGTCAGCACTGACGTGTTCCATTTTCAGCAGGCTCAGCTGGGGCATGGCGATCAGGTTGTCTTTTCTAACCTG ACGCTAACCATCGAGCAAGG
Product: phosphate ABC transporter periplasmic-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRLKLLVALVAALLLSACNDPHTGTFIFTAIPDQDESQLEKRFGTIALYLEDQLGVPVKYVPVKSYAAAVTAFRNDEVQM AWFGGLSGVQARRLVPGSQAIAQGQEDTAFKSYFIANSSTGLKPVETLGEDFIAQPSFTFGSKGSTSGRLMPEFYLRDTF NEAPDTLFEKVGFSGDHSRTIALVQSGAYATGAVNFKVWERELAEGKIDTSKVSVIWETPSYPDYHWTVRGDLNERFGDG FSQRVTEVLLAIDDPVLLKAFPREKFVPASNADYAPIEETASAIGLLD
Sequences:
>Translated_288_residues MRLKLLVALVAALLLSACNDPHTGTFIFTAIPDQDESQLEKRFGTIALYLEDQLGVPVKYVPVKSYAAAVTAFRNDEVQM AWFGGLSGVQARRLVPGSQAIAQGQEDTAFKSYFIANSSTGLKPVETLGEDFIAQPSFTFGSKGSTSGRLMPEFYLRDTF NEAPDTLFEKVGFSGDHSRTIALVQSGAYATGAVNFKVWERELAEGKIDTSKVSVIWETPSYPDYHWTVRGDLNERFGDG FSQRVTEVLLAIDDPVLLKAFPREKFVPASNADYAPIEETASAIGLLD >Mature_288_residues MRLKLLVALVAALLLSACNDPHTGTFIFTAIPDQDESQLEKRFGTIALYLEDQLGVPVKYVPVKSYAAAVTAFRNDEVQM AWFGGLSGVQARRLVPGSQAIAQGQEDTAFKSYFIANSSTGLKPVETLGEDFIAQPSFTFGSKGSTSGRLMPEFYLRDTF NEAPDTLFEKVGFSGDHSRTIALVQSGAYATGAVNFKVWERELAEGKIDTSKVSVIWETPSYPDYHWTVRGDLNERFGDG FSQRVTEVLLAIDDPVLLKAFPREKFVPASNADYAPIEETASAIGLLD
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31554; Mature: 31554
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKLLVALVAALLLSACNDPHTGTFIFTAIPDQDESQLEKRFGTIALYLEDQLGVPVKY CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCEEEEEEECCCCCCEEE VPVKSYAAAVTAFRNDEVQMAWFGGLSGVQARRLVPGSQAIAQGQEDTAFKSYFIANSST EEHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEECCCC GLKPVETLGEDFIAQPSFTFGSKGSTSGRLMPEFYLRDTFNEAPDTLFEKVGFSGDHSRT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEE IALVQSGAYATGAVNFKVWERELAEGKIDTSKVSVIWETPSYPDYHWTVRGDLNERFGDG EEEEECCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHCCC FSQRVTEVLLAIDDPVLLKAFPREKFVPASNADYAPIEETASAIGLLD HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRLKLLVALVAALLLSACNDPHTGTFIFTAIPDQDESQLEKRFGTIALYLEDQLGVPVKY CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCEEEEEEECCCCCCEEE VPVKSYAAAVTAFRNDEVQMAWFGGLSGVQARRLVPGSQAIAQGQEDTAFKSYFIANSST EEHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEECCCC GLKPVETLGEDFIAQPSFTFGSKGSTSGRLMPEFYLRDTFNEAPDTLFEKVGFSGDHSRT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEE IALVQSGAYATGAVNFKVWERELAEGKIDTSKVSVIWETPSYPDYHWTVRGDLNERFGDG EEEEECCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHCCC FSQRVTEVLLAIDDPVLLKAFPREKFVPASNADYAPIEETASAIGLLD HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]