Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834347

Identifier: 110834347

GI number: 110834347

Start: 1693962

End: 1694990

Strand: Direct

Name: 110834347

Synonym: ABO_1486

Alternate gene names: NA

Gene position: 1693962-1694990 (Clockwise)

Preceding gene: 110834346

Following gene: 110834352

Centisome position: 54.29

GC content: 52.58

Gene sequence:

>1029_bases
ATGAAAGTCAGGCTGCACCCGGAAAAGTTAAAAGCGAACCTGGATACCATCGGTTTCATTATCGACCTGGCCATGATTGT
GCTGGTGATCGCCAATTTGAGCCTAATCCTGTTTGACTGGCTGTTTCAGGTGCCACCTGTTCAGGATTTTCTTGCTTCGC
TGGTACCGGCTTTCCACAACTTTTATCGCGACACCATTCATAGTGATTTTCTGTTCTACGACCTCTGCTTTGTGGCGGTC
TACCTAACGGAATTCACCATTCGCTGGATTGTTGCTATTGCCCGACACACATACCATCGCTGGTTTTTCTATCCGTTTGC
CCATTGGTATGACCTGCTCGGCTGTATTCCCGTGGGTAGCTTCCGCTGGCTGCGGATTCTGCGCGTTATCAGCCTATTAA
TACGTCTACAACGTATGGGCATCGTGGATCTATCTCAGACCTGGTTGGGGCAAACTATTCTCAAATACTACGGTATTGTT
GTGGAGGAAATATCCGACCGTGTCGTCATCAACGTGCTGAGTGGCGCGCAGCGTGAAATCGGGGGTGGCAGCCCCCTGCT
TCACCGTATTGAGTCCCAGGTCCTAGTACCCCGCAAAGAACAACTGGTTAGTTTTGTCGCCGCGCGCATTGCCAACGCAA
CCCAAAAAAGTCATGGCCAATACCGCGATCAATTAGCCGAATACTTCTCGCACCTGACAGACGAATCCCTAGTGCGCACC
CAAGCCGGCCGACGTCTTGCCAGCATTCCCGTTGCGGGCCCCCGCGCCATCGCGCTACTTGGCGAGGCAGTACGCGAAAC
GGGTAGCGCCTTCGTGGATCAGCTGGTGGATGACCTGGCCTCCTCTGCCAACCGCGCCCAACTGGAGCAGTTATTACATG
ACTTGATTGACGCTGCGGGCGGCGAGGGCGAACAGCTGGATGCGTTGATTCGCGACACTTTGCTAGACGTTCTTGAGCAA
GTTAAAAATCAGGTCGCTGTTCAGCAGTGGAAACTGGAAGAGCAAGACCCATCACTCAAAAGTTTATAA

Upstream 100 bases:

>100_bases
GCTGGACACCACCGGTGTGGATTATCAGATGCGCGCAATGGAAAAGCCCTCGGATCATTGTCCGGTCTGGGCACGTTTTA
ACGGCTGAGCAGGTTATTCC

Downstream 100 bases:

>100_bases
CCCGTATAACATAGAGAAAGCGAGCAACACGAACCCCAACAGGAACAGCACCTACACCACCGGCAATGATGGCTCGAGCT
TTCCCATTCCTAGGTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKVRLHPEKLKANLDTIGFIIDLAMIVLVIANLSLILFDWLFQVPPVQDFLASLVPAFHNFYRDTIHSDFLFYDLCFVAV
YLTEFTIRWIVAIARHTYHRWFFYPFAHWYDLLGCIPVGSFRWLRILRVISLLIRLQRMGIVDLSQTWLGQTILKYYGIV
VEEISDRVVINVLSGAQREIGGGSPLLHRIESQVLVPRKEQLVSFVAARIANATQKSHGQYRDQLAEYFSHLTDESLVRT
QAGRRLASIPVAGPRAIALLGEAVRETGSAFVDQLVDDLASSANRAQLEQLLHDLIDAAGGEGEQLDALIRDTLLDVLEQ
VKNQVAVQQWKLEEQDPSLKSL

Sequences:

>Translated_342_residues
MKVRLHPEKLKANLDTIGFIIDLAMIVLVIANLSLILFDWLFQVPPVQDFLASLVPAFHNFYRDTIHSDFLFYDLCFVAV
YLTEFTIRWIVAIARHTYHRWFFYPFAHWYDLLGCIPVGSFRWLRILRVISLLIRLQRMGIVDLSQTWLGQTILKYYGIV
VEEISDRVVINVLSGAQREIGGGSPLLHRIESQVLVPRKEQLVSFVAARIANATQKSHGQYRDQLAEYFSHLTDESLVRT
QAGRRLASIPVAGPRAIALLGEAVRETGSAFVDQLVDDLASSANRAQLEQLLHDLIDAAGGEGEQLDALIRDTLLDVLEQ
VKNQVAVQQWKLEEQDPSLKSL
>Mature_342_residues
MKVRLHPEKLKANLDTIGFIIDLAMIVLVIANLSLILFDWLFQVPPVQDFLASLVPAFHNFYRDTIHSDFLFYDLCFVAV
YLTEFTIRWIVAIARHTYHRWFFYPFAHWYDLLGCIPVGSFRWLRILRVISLLIRLQRMGIVDLSQTWLGQTILKYYGIV
VEEISDRVVINVLSGAQREIGGGSPLLHRIESQVLVPRKEQLVSFVAARIANATQKSHGQYRDQLAEYFSHLTDESLVRT
QAGRRLASIPVAGPRAIALLGEAVRETGSAFVDQLVDDLASSANRAQLEQLLHDLIDAAGGEGEQLDALIRDTLLDVLEQ
VKNQVAVQQWKLEEQDPSLKSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38846; Mature: 38846

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKVRLHPEKLKANLDTIGFIIDLAMIVLVIANLSLILFDWLFQVPPVQDFLASLVPAFHN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FYRDTIHSDFLFYDLCFVAVYLTEFTIRWIVAIARHTYHRWFFYPFAHWYDLLGCIPVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FRWLRILRVISLLIRLQRMGIVDLSQTWLGQTILKYYGIVVEEISDRVVINVLSGAQREI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHC
GGGSPLLHRIESQVLVPRKEQLVSFVAARIANATQKSHGQYRDQLAEYFSHLTDESLVRT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
QAGRRLASIPVAGPRAIALLGEAVRETGSAFVDQLVDDLASSANRAQLEQLLHDLIDAAG
HHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GEGEQLDALIRDTLLDVLEQVKNQVAVQQWKLEEQDPSLKSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA