| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is ada [H]
Identifier: 110834273
GI number: 110834273
Start: 1610256
End: 1611320
Strand: Direct
Name: ada [H]
Synonym: ABO_1412
Alternate gene names: 110834273
Gene position: 1610256-1611320 (Clockwise)
Preceding gene: 110834272
Following gene: 110834274
Centisome position: 51.61
GC content: 56.62
Gene sequence:
>1065_bases ATGAGCACCGAGCAACAACGGCGACAAGCCATCAAAGACCACTCCCCCTTGCCGGGAGATAACTTTGTTTATGGTGTGCT GACGACGGGAATTTTCTGCTTGCCTATCTGTCCATCGCGACGTCCTCGCGATGAAAATGTTCGTCTCTTCGACACCCCCG TACAGGCTATTCAGAATGGCTACCGACCCTGTCGGCGCTGCCATCCACTTGGAGATATCGCCGCACCATCAACAGCCACA GTGATTGCGCTATGTCGATTGATTGAAGCGGCCGAACGAAAACCCACGCTCACGGAGTTATCGGCGCAATCGGGCTGGAG CGCTCATCATCTGCAACGCCAATTCAAAGCGGTTGCCGGCATTTCACCGCACCAGTACGGTGTCGCCATTCGCCGCCGGC GAGCGCAACAGCAGCTCCGCTATAAACAGTCATTGACCCTCTCGGCTCACTTGGCCGGATTTGACTCGACTAGCCACCTA CATGCCGTCGCTGGCAACACCCTTGGCATGAAACCAGGCCAATATCGACAAGCAGGTAAAGATATGGCACTTCGATTTGC CATCGCCGAAAGCTCACTCGGCTCTGTGCTGGTGGCAGAAAGCGAGCGTGGCATCTGTGCCGTCACCATAGGGGATGATC CCAGCGTGTTACTGCAGGATTTCGAACAGGAATTCAGTGGCGCCACCCTGCTGCCGGGTAATAGTGAGTTTGATCAGCGC GTTGCCATGGTCATTACCCTAATCGACGACCCGCATCAGATTACTCAAGCACCTCGTGATCTGCTGCCTTTGGATATTCG AGGGACCGCCTTCCAGCAACAAGTCTGGGCGGCACTACAGACGATTCCCACAGGCCAGACCCTGTCTTATCAGGCACTGG CAGTAAAGCTTGGCAAGCCTACAGCCGCCCGAGCTGTTGCCCAGGCCTGCGCCAGTAACCGGCTGGCTGTTTTGGTTCCT TGTCATCGTATTGTGCGCACTGATGGCGGGCTGTCTGGCTACCGCTGGGGTGTTGGCCGCAAAGCCGCTTTACTCGACCG CGAACGGGAGCCCAGCGACAAATGA
Upstream 100 bases:
>100_bases TTTGGATGCTCACTCACCCTGGTTTCCGCGATGCTCCCAGTCAGTCTCATTTCCCTTCATACTGCGGGTAGCACATATGG AAACAGGTCTGAATACAACC
Downstream 100 bases:
>100_bases CAACGGTAAAGCTGCCACTACCCGCCCACTTTAGCGTTTCCGACTTTCTTCATTTTCATGGTCGAGACAGTCATGCCGTT TCCGAACGGGTAGATGCCCT
Product: methylated-DNA-[protein]-cysteine S-methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSTEQQRRQAIKDHSPLPGDNFVYGVLTTGIFCLPICPSRRPRDENVRLFDTPVQAIQNGYRPCRRCHPLGDIAAPSTAT VIALCRLIEAAERKPTLTELSAQSGWSAHHLQRQFKAVAGISPHQYGVAIRRRRAQQQLRYKQSLTLSAHLAGFDSTSHL HAVAGNTLGMKPGQYRQAGKDMALRFAIAESSLGSVLVAESERGICAVTIGDDPSVLLQDFEQEFSGATLLPGNSEFDQR VAMVITLIDDPHQITQAPRDLLPLDIRGTAFQQQVWAALQTIPTGQTLSYQALAVKLGKPTAARAVAQACASNRLAVLVP CHRIVRTDGGLSGYRWGVGRKAALLDREREPSDK
Sequences:
>Translated_354_residues MSTEQQRRQAIKDHSPLPGDNFVYGVLTTGIFCLPICPSRRPRDENVRLFDTPVQAIQNGYRPCRRCHPLGDIAAPSTAT VIALCRLIEAAERKPTLTELSAQSGWSAHHLQRQFKAVAGISPHQYGVAIRRRRAQQQLRYKQSLTLSAHLAGFDSTSHL HAVAGNTLGMKPGQYRQAGKDMALRFAIAESSLGSVLVAESERGICAVTIGDDPSVLLQDFEQEFSGATLLPGNSEFDQR VAMVITLIDDPHQITQAPRDLLPLDIRGTAFQQQVWAALQTIPTGQTLSYQALAVKLGKPTAARAVAQACASNRLAVLVP CHRIVRTDGGLSGYRWGVGRKAALLDREREPSDK >Mature_353_residues STEQQRRQAIKDHSPLPGDNFVYGVLTTGIFCLPICPSRRPRDENVRLFDTPVQAIQNGYRPCRRCHPLGDIAAPSTATV IALCRLIEAAERKPTLTELSAQSGWSAHHLQRQFKAVAGISPHQYGVAIRRRRAQQQLRYKQSLTLSAHLAGFDSTSHLH AVAGNTLGMKPGQYRQAGKDMALRFAIAESSLGSVLVAESERGICAVTIGDDPSVLLQDFEQEFSGATLLPGNSEFDQRV AMVITLIDDPHQITQAPRDLLPLDIRGTAFQQQVWAALQTIPTGQTLSYQALAVKLGKPTAARAVAQACASNRLAVLVPC HRIVRTDGGLSGYRWGVGRKAALLDREREPSDK
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=172, Percent_Identity=29.6511627906977, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788542, Length=356, Percent_Identity=46.3483146067416, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1787596, Length=89, Percent_Identity=49.438202247191, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115533068, Length=166, Percent_Identity=33.1325301204819, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533070, Length=131, Percent_Identity=35.8778625954198, Blast_Score=100, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6320001, Length=96, Percent_Identity=45.8333333333333, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17137554, Length=88, Percent_Identity=48.8636363636364, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 38686; Mature: 38554
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEQQRRQAIKDHSPLPGDNFVYGVLTTGIFCLPICPSRRPRDENVRLFDTPVQAIQNG CCCHHHHHHHHHCCCCCCCCCEEHHHHHHCEEEEECCCCCCCCCCCCEEECCHHHHHHHC YRPCRRCHPLGDIAAPSTATVIALCRLIEAAERKPTLTELSAQSGWSAHHLQRQFKAVAG CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHC ISPHQYGVAIRRRRAQQQLRYKQSLTLSAHLAGFDSTSHLHAVAGNTLGMKPGQYRQAGK CCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCC DMALRFAIAESSLGSVLVAESERGICAVTIGDDPSVLLQDFEQEFSGATLLPGNSEFDQR CCEEEEEEECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHE VAMVITLIDDPHQITQAPRDLLPLDIRGTAFQQQVWAALQTIPTGQTLSYQALAVKLGKP EEEEEEECCCCHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC TAARAVAQACASNRLAVLVPCHRIVRTDGGLSGYRWGVGRKAALLDREREPSDK HHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCCCC >Mature Secondary Structure STEQQRRQAIKDHSPLPGDNFVYGVLTTGIFCLPICPSRRPRDENVRLFDTPVQAIQNG CCHHHHHHHHHCCCCCCCCCEEHHHHHHCEEEEECCCCCCCCCCCCEEECCHHHHHHHC YRPCRRCHPLGDIAAPSTATVIALCRLIEAAERKPTLTELSAQSGWSAHHLQRQFKAVAG CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHC ISPHQYGVAIRRRRAQQQLRYKQSLTLSAHLAGFDSTSHLHAVAGNTLGMKPGQYRQAGK CCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCC DMALRFAIAESSLGSVLVAESERGICAVTIGDDPSVLLQDFEQEFSGATLLPGNSEFDQR CCEEEEEEECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHE VAMVITLIDDPHQITQAPRDLLPLDIRGTAFQQQVWAALQTIPTGQTLSYQALAVKLGKP EEEEEEECCCCHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC TAARAVAQACASNRLAVLVPCHRIVRTDGGLSGYRWGVGRKAALLDREREPSDK HHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]