| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ispZ [H]
Identifier: 110834254
GI number: 110834254
Start: 1587068
End: 1587799
Strand: Direct
Name: ispZ [H]
Synonym: ABO_1393
Alternate gene names: 110834254
Gene position: 1587068-1587799 (Clockwise)
Preceding gene: 110834247
Following gene: 110834255
Centisome position: 50.87
GC content: 46.72
Gene sequence:
>732_bases ATGGCTGGTCGTGCCACCATATCATTCGCATTCTGCTACCGCACGGCACAGGATAAGGCGCTGTTAATGAAGCAACTACT TGATTACCTTCCGGTAATTGTCTTTTTCGGGCTCTACTTTCTCAGCGGCCGGGATATCATGCTCGCCACTTGGGGCATCC TGATTGCCACGACACTTCAGGTCACTTTAGGTTGGCTGATCTGGCGCAAAGTGCAAAAAATGCATTTGATCGTCTTCGTC ATCACCTTGATCTTCGGCTCAATGACCCTGTTTTTTAATAATGATGTCTTTATCAAATGGCGTCCTTCCATCATCAGTTT CACACTGGGTGGCGTGCTGCTGCTGGGCCATTTCCTGCGTGAGCGCAATCTACTCCAGCGTTTATGTGAGTCGTTAATGG TGTCTGGCCTTGGCTTTGTGGTGGCGCTATCGCGCAAAGACTGGTCTTTTCTCAATATCGCGTTCGTACTTTACTTTGTT TTTATCGGTGCACTTAATCTGTACATCGCCTTCAACTTCAGCACCGACTTCTGGGTTAACTTCAAATTATTTGGCTTTAC TGCCTTGCAAATAATCTTCTATATCAGCATGTTCGCCTATGTATTTAAGAAAATGCCTGAAGAAGATCGCAAACGGATAA TGAAACAGGAAAAACCAGCTGGCCGGAACAATCAGCCGCCCTCCTCCGACAACGACAAAAAGGAAGACCATGCTGTACGC GATCATCAGTGA
Upstream 100 bases:
>100_bases GAAAAATCGGGTCGATTACGCTACCACAGTAAGACGAAAAATAATGCAGGGCGGCAGGGTGAATTGCCTGCCTGATGCCG TTACCATCGTTGCCCTGTGA
Downstream 100 bases:
>100_bases AGATAGCCCGAACTCCTTGCCGTTACGGCAACAGGCCCGCCCTGCTCACCTAGCAAGATTGGAATCCTTACGTGATCAAG GTCGACTGGAACTGGCTGGG
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAGRATISFAFCYRTAQDKALLMKQLLDYLPVIVFFGLYFLSGRDIMLATWGILIATTLQVTLGWLIWRKVQKMHLIVFV ITLIFGSMTLFFNNDVFIKWRPSIISFTLGGVLLLGHFLRERNLLQRLCESLMVSGLGFVVALSRKDWSFLNIAFVLYFV FIGALNLYIAFNFSTDFWVNFKLFGFTALQIIFYISMFAYVFKKMPEEDRKRIMKQEKPAGRNNQPPSSDNDKKEDHAVR DHQ
Sequences:
>Translated_243_residues MAGRATISFAFCYRTAQDKALLMKQLLDYLPVIVFFGLYFLSGRDIMLATWGILIATTLQVTLGWLIWRKVQKMHLIVFV ITLIFGSMTLFFNNDVFIKWRPSIISFTLGGVLLLGHFLRERNLLQRLCESLMVSGLGFVVALSRKDWSFLNIAFVLYFV FIGALNLYIAFNFSTDFWVNFKLFGFTALQIIFYISMFAYVFKKMPEEDRKRIMKQEKPAGRNNQPPSSDNDKKEDHAVR DHQ >Mature_242_residues AGRATISFAFCYRTAQDKALLMKQLLDYLPVIVFFGLYFLSGRDIMLATWGILIATTLQVTLGWLIWRKVQKMHLIVFVI TLIFGSMTLFFNNDVFIKWRPSIISFTLGGVLLLGHFLRERNLLQRLCESLMVSGLGFVVALSRKDWSFLNIAFVLYFVF IGALNLYIAFNFSTDFWVNFKLFGFTALQIIFYISMFAYVFKKMPEEDRKRIMKQEKPAGRNNQPPSSDNDKKEDHAVRD HQ
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=189, Percent_Identity=41.2698412698413, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 28249; Mature: 28118
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRATISFAFCYRTAQDKALLMKQLLDYLPVIVFFGLYFLSGRDIMLATWGILIATTLQ CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VTLGWLIWRKVQKMHLIVFVITLIFGSMTLFFNNDVFIKWRPSIISFTLGGVLLLGHFLR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHH ERNLLQRLCESLMVSGLGFVVALSRKDWSFLNIAFVLYFVFIGALNLYIAFNFSTDFWVN HHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE FKLFGFTALQIIFYISMFAYVFKKMPEEDRKRIMKQEKPAGRNNQPPSSDNDKKEDHAVR EEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC DHQ CCC >Mature Secondary Structure AGRATISFAFCYRTAQDKALLMKQLLDYLPVIVFFGLYFLSGRDIMLATWGILIATTLQ CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VTLGWLIWRKVQKMHLIVFVITLIFGSMTLFFNNDVFIKWRPSIISFTLGGVLLLGHFLR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHH ERNLLQRLCESLMVSGLGFVVALSRKDWSFLNIAFVLYFVFIGALNLYIAFNFSTDFWVN HHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE FKLFGFTALQIIFYISMFAYVFKKMPEEDRKRIMKQEKPAGRNNQPPSSDNDKKEDHAVR EEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC DHQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA