| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is chpR [C]
Identifier: 110834233
GI number: 110834233
Start: 1559280
End: 1559546
Strand: Direct
Name: chpR [C]
Synonym: ABO_1372
Alternate gene names: 110834233
Gene position: 1559280-1559546 (Clockwise)
Preceding gene: 110834232
Following gene: 110834242
Centisome position: 49.97
GC content: 47.94
Gene sequence:
>267_bases ATGTGTGAGGTGCTTATGAAATTGAAAGTGCAGAAAATTAGTAATGGCGCAGGACTTCGAGTCCCTAAAACTGTCTTGCA GCATCTTGGTCTTGATGTGGGAAGTATCGTTGATATGGAACTGACTGATGAGCAGTTGATCATTCGCCCAAAGCCCATGC CGACCTTGGAAGAGATGTTGGCAGCTTGTACACCAGAGAATACCGCACTGAGCGAGGAAGACCGCGAGTGGCTTAGCGAT GGTCCGGTCGGTAAAGAGATTTTGTGA
Upstream 100 bases:
>100_bases CCGTGGCCGAACCTCTATATATTGCATGGCTAAATTCTTGACCATCACTACCACATGGTTGTTACGGGTGATTTATCTAT TTAAATTGAGGTTACACCCA
Downstream 100 bases:
>100_bases TCCCCTGCCCGGCGCCACCAATAATGTAACAGGGATGCAGCGGTTGCGTCGCGCACAGTTGACACGGCATTCGTGCTACC CGATTGATTATCATAATAAA
Product: PemI-like protein
Products: NA
Alternate protein names: PemI-Like Protein
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MCEVLMKLKVQKISNGAGLRVPKTVLQHLGLDVGSIVDMELTDEQLIIRPKPMPTLEEMLAACTPENTALSEEDREWLSD GPVGKEIL
Sequences:
>Translated_88_residues MCEVLMKLKVQKISNGAGLRVPKTVLQHLGLDVGSIVDMELTDEQLIIRPKPMPTLEEMLAACTPENTALSEEDREWLSD GPVGKEIL >Mature_88_residues MCEVLMKLKVQKISNGAGLRVPKTVLQHLGLDVGSIVDMELTDEQLIIRPKPMPTLEEMLAACTPENTALSEEDREWLSD GPVGKEIL
Specific function: May Be Involved In The Regulation Of Cell Growth. It Acts As A Suppressor Of The Inhibitory Function Of Chpb Protein. Both Chps And Chpb Bind To The Promoter Region Of The Chpsb Operon To Autoregulate Their Synthesis. [C]
COG id: COG2336
COG function: function code T; Growth regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9715; Mature: 9715
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEVLMKLKVQKISNGAGLRVPKTVLQHLGLDVGSIVDMELTDEQLIIRPKPMPTLEEML CCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCEECCCEEEECCCCCCHHHHHH AACTPENTALSEEDREWLSDGPVGKEIL HHCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MCEVLMKLKVQKISNGAGLRVPKTVLQHLGLDVGSIVDMELTDEQLIIRPKPMPTLEEML CCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCEECCCEEEECCCCCCHHHHHH AACTPENTALSEEDREWLSDGPVGKEIL HHCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA