| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is corA [H]
Identifier: 110834196
GI number: 110834196
Start: 1517255
End: 1518145
Strand: Direct
Name: corA [H]
Synonym: ABO_1335
Alternate gene names: 110834196
Gene position: 1517255-1518145 (Clockwise)
Preceding gene: 110834194
Following gene: 110834199
Centisome position: 48.63
GC content: 49.94
Gene sequence:
>891_bases ATGCCTACCTTATCTGAGGAAGGCAGCTGGATCGACCTAGTAGATGCCGAGGACGCAGAACGCAACCTGGTTCAGCAATT TCTCCAGACCGAACTACCTGATTCCGACGATATGGAAGAAATTGAAGCTTCCGCCCGTTTTTTCAGTGATGAGCAGGGGC TTCATGTCCACTCTTTGTTTATGTTCCAATCCGAGGGCCGGGCACGGACCTCCACAGTTGCTTTTATCGTCCAAGAAGGG CGATTGCTCTCATTCCGAGATTCCCGGTTACCGGATTTCCGCTTATTGCGCCTGCGAGTCCGCCGGGGTTGGGTCAAGGT ATCCCAGCCTTTGGATATTTTGCTAAGTATACTTGATCAAAAAGTGGAAAATCTTGCGGATGCGCTTGAGGACGTACACC GAGACTTGGAAAAAGTCGGCTACAGCGTGCTGGAGGAAGAAAACGGAAAACTGGAAGAAGACATTGAGCGTCTGGCCCAG CTAGAAGACACTAACGGGAAAATCCGTTTGTGTTTGATGGATACCCAGCGCTCTATCTCGTTTATTCAGCGCTATGTGCG CCCTGATAAAATTCGGCGGAGAACCTGTGCGGAAATTCAGCATGACCTAGATACGTTGATGTCACACACCACCTTCCTGT TCGACAAAATCAACTTTCTGATGGATGCAGCCCAGGGCTTTATCAACATTCAGCAAAATCAGATCATCAAGATATTCTCT ATTGCCGCCGTGGTGTTTCTGCCCCCCACCATGATCGCCAGCATCTACGGGATGAACTTCGACATTATGCCAGAACTGGA CTTCCGCTTTGGCTACCCCATGGCAATTGGTTTGATGGTGTTGTCCGGCATGGCGCCGTATTGGTACTTCAAACGCAAGG GCTGGTTGTAG
Upstream 100 bases:
>100_bases TAAACGGCGTATTGCCGGCAAGAATGATCAGGAAAACATCATGCTGCATATTTTTCGTATTGAAGATGGTGTTCTACGAG AAAAAGAGGTGAATGCCACT
Downstream 100 bases:
>100_bases AAGGCATCGGTGGTGGGTAGCAGAGGCTCACCCCCCGCACATCAACCGGCCAATACCCATCCGCTCGTTGTCTCAGCCGC CTTGCCATCCTCGGCCAGCT
Product: Mg2+/Co2+ transporter
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPTLSEEGSWIDLVDAEDAERNLVQQFLQTELPDSDDMEEIEASARFFSDEQGLHVHSLFMFQSEGRARTSTVAFIVQEG RLLSFRDSRLPDFRLLRLRVRRGWVKVSQPLDILLSILDQKVENLADALEDVHRDLEKVGYSVLEEENGKLEEDIERLAQ LEDTNGKIRLCLMDTQRSISFIQRYVRPDKIRRRTCAEIQHDLDTLMSHTTFLFDKINFLMDAAQGFINIQQNQIIKIFS IAAVVFLPPTMIASIYGMNFDIMPELDFRFGYPMAIGLMVLSGMAPYWYFKRKGWL
Sequences:
>Translated_296_residues MPTLSEEGSWIDLVDAEDAERNLVQQFLQTELPDSDDMEEIEASARFFSDEQGLHVHSLFMFQSEGRARTSTVAFIVQEG RLLSFRDSRLPDFRLLRLRVRRGWVKVSQPLDILLSILDQKVENLADALEDVHRDLEKVGYSVLEEENGKLEEDIERLAQ LEDTNGKIRLCLMDTQRSISFIQRYVRPDKIRRRTCAEIQHDLDTLMSHTTFLFDKINFLMDAAQGFINIQQNQIIKIFS IAAVVFLPPTMIASIYGMNFDIMPELDFRFGYPMAIGLMVLSGMAPYWYFKRKGWL >Mature_295_residues PTLSEEGSWIDLVDAEDAERNLVQQFLQTELPDSDDMEEIEASARFFSDEQGLHVHSLFMFQSEGRARTSTVAFIVQEGR LLSFRDSRLPDFRLLRLRVRRGWVKVSQPLDILLSILDQKVENLADALEDVHRDLEKVGYSVLEEENGKLEEDIERLAQL EDTNGKIRLCLMDTQRSISFIQRYVRPDKIRRRTCAEIQHDLDTLMSHTTFLFDKINFLMDAAQGFINIQQNQIIKIFSI AAVVFLPPTMIASIYGMNFDIMPELDFRFGYPMAIGLMVLSGMAPYWYFKRKGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=289, Percent_Identity=49.8269896193772, Blast_Score=290, Evalue=6e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 34355; Mature: 34224
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLSEEGSWIDLVDAEDAERNLVQQFLQTELPDSDDMEEIEASARFFSDEQGLHVHSLF CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEHEE MFQSEGRARTSTVAFIVQEGRLLSFRDSRLPDFRLLRLRVRRGWVKVSQPLDILLSILDQ EECCCCCCHHHHEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KVENLADALEDVHRDLEKVGYSVLEEENGKLEEDIERLAQLEDTNGKIRLCLMDTQRSIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHH FIQRYVRPDKIRRRTCAEIQHDLDTLMSHTTFLFDKINFLMDAAQGFINIQQNQIIKIFS HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH IAAVVFLPPTMIASIYGMNFDIMPELDFRFGYPMAIGLMVLSGMAPYWYFKRKGWL HHHHHHCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCC >Mature Secondary Structure PTLSEEGSWIDLVDAEDAERNLVQQFLQTELPDSDDMEEIEASARFFSDEQGLHVHSLF CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEHEE MFQSEGRARTSTVAFIVQEGRLLSFRDSRLPDFRLLRLRVRRGWVKVSQPLDILLSILDQ EECCCCCCHHHHEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KVENLADALEDVHRDLEKVGYSVLEEENGKLEEDIERLAQLEDTNGKIRLCLMDTQRSIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHH FIQRYVRPDKIRRRTCAEIQHDLDTLMSHTTFLFDKINFLMDAAQGFINIQQNQIIKIFS HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH IAAVVFLPPTMIASIYGMNFDIMPELDFRFGYPMAIGLMVLSGMAPYWYFKRKGWL HHHHHHCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]