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The map label for this gene is gspF [H]

Identifier: 110834174

GI number: 110834174

Start: 1490778

End: 1491995

Strand: Direct

Name: gspF [H]

Synonym: ABO_1313

Alternate gene names: 110834174

Gene position: 1490778-1491995 (Clockwise)

Preceding gene: 110834173

Following gene: 110834175

Centisome position: 47.78

GC content: 58.13

Gene sequence:

>1218_bases
ATGCCAGCATTTGAATACCGCTCTCTGGATCACAGGGGCAAGATCAACAAAGGCACGCTGGAAGCAGACAGTGCCCGCCA
GGTGCGCCAGCAATTGCGCGACAAGGGCTGGGTGCCGCTGGAGGTCAATGAAGCCAACGACTCCAGCAGCCAGGGCATGG
GCCGGTTTGCCGGGTCCGGCAAAATCAATGGTGCTGAGCAGGCGCTGATAACGCGTCAACTGGCCACCCTGCTGAAATCC
GGCCTGCCGGTAGAACAGGCCTTATCTGCGGTCTCCAAGCAGGCCGCCAACGACCGTATCGAACGGATTATGCTGGCGGT
GCGCGCCAAAGTGCGTGAAGGTTATAGCCTAGCGCACAGTTTCGAATCATTTCCCCGTGCTTTCCCGGAAATGTACCGCG
CCACGGTAGCGGCCGGTGAGCAGAGCGGGCATTTGGAACAAGTGCTGGAGCAACTGGCGGATTACCTGGAAACCCGCCAC
GACACTGGGCGTTCCGTAGCCCAGGCGATGATTTATCCTGCGTTTATCATGGTGTTTGCCTCCATCGTCATTATGCTGAT
GATGACCTTCGTGGTCCCAAAGCTGGTGGCAGTGTTTGAGGGACGAGATCAAGCATTACCGTTACTCACCCGTATTGTCA
TGGCCATGAGCGACTTTGCTCGGGGCTGGGGCTGGTTGGTTGTGTTATTGATCGTTGTGGCCGTGGTGGTATTTATGCGG
GCCATGCGTGATCAGCGCTTTCGATTACGGGTGCACCAGCGTTTGGTGAATATGCCTCTGGTAGGTACTATGCTGCGGGC
GGGTGACAGTGCCCGGCTGGCCAGCACGCTGGGTATCCTCGGTCGCTCCGGTGTGCCGTTGGTGGATGCCCTGTTTATCG
CCGCGCAGGTGGTGGGCAATCTGGCGGTCCGCAATGCGGTAAAAAACGCGGCCGCTAAGGTCCGCGAAGGCGGCAGCCTC
AGCCGAGCCCTGGATGCCAGTGGTTATTTTCCTCCCATGCTGGTGCAGATGATTGCCAGTGGCGAGGCCAGCGGCGAACT
GGACAACATGCTGACCCGGGCTGCGGATTATCAGGAACGAGAACTCAGCAGTACGATCGGGACCATGGTAGGGCTGCTCG
GTCCAATCATGTTGTTGGTCATGGCCGGAGTGGTGGTCATGATCGTCCTCTCGGTCATGCTGCCGATCATGCAAATGAAT
AACTTACTAGCCGGTTAA

Upstream 100 bases:

>100_bases
GGTATCCGCGAAGATGGTTGGCGAAAAGTGCTCGGCGGACACACCAGTGTAGAAGAGGTCCTGCGGGTAACCCGCGAGGA
CTAACGGGACAGTATTCTCC

Downstream 100 bases:

>100_bases
GGTGAAGAAATGAAAGCAAAAAAGGCCATGTCGGGGTTTACCCTGCTGGAAATTATGGTTGTGGTTGCGATTATCGGCCT
GCTGGCTGCGGTGATTGTGC

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPAFEYRSLDHRGKINKGTLEADSARQVRQQLRDKGWVPLEVNEANDSSSQGMGRFAGSGKINGAEQALITRQLATLLKS
GLPVEQALSAVSKQAANDRIERIMLAVRAKVREGYSLAHSFESFPRAFPEMYRATVAAGEQSGHLEQVLEQLADYLETRH
DTGRSVAQAMIYPAFIMVFASIVIMLMMTFVVPKLVAVFEGRDQALPLLTRIVMAMSDFARGWGWLVVLLIVVAVVVFMR
AMRDQRFRLRVHQRLVNMPLVGTMLRAGDSARLASTLGILGRSGVPLVDALFIAAQVVGNLAVRNAVKNAAAKVREGGSL
SRALDASGYFPPMLVQMIASGEASGELDNMLTRAADYQERELSSTIGTMVGLLGPIMLLVMAGVVVMIVLSVMLPIMQMN
NLLAG

Sequences:

>Translated_405_residues
MPAFEYRSLDHRGKINKGTLEADSARQVRQQLRDKGWVPLEVNEANDSSSQGMGRFAGSGKINGAEQALITRQLATLLKS
GLPVEQALSAVSKQAANDRIERIMLAVRAKVREGYSLAHSFESFPRAFPEMYRATVAAGEQSGHLEQVLEQLADYLETRH
DTGRSVAQAMIYPAFIMVFASIVIMLMMTFVVPKLVAVFEGRDQALPLLTRIVMAMSDFARGWGWLVVLLIVVAVVVFMR
AMRDQRFRLRVHQRLVNMPLVGTMLRAGDSARLASTLGILGRSGVPLVDALFIAAQVVGNLAVRNAVKNAAAKVREGGSL
SRALDASGYFPPMLVQMIASGEASGELDNMLTRAADYQERELSSTIGTMVGLLGPIMLLVMAGVVVMIVLSVMLPIMQMN
NLLAG
>Mature_404_residues
PAFEYRSLDHRGKINKGTLEADSARQVRQQLRDKGWVPLEVNEANDSSSQGMGRFAGSGKINGAEQALITRQLATLLKSG
LPVEQALSAVSKQAANDRIERIMLAVRAKVREGYSLAHSFESFPRAFPEMYRATVAAGEQSGHLEQVLEQLADYLETRHD
TGRSVAQAMIYPAFIMVFASIVIMLMMTFVVPKLVAVFEGRDQALPLLTRIVMAMSDFARGWGWLVVLLIVVAVVVFMRA
MRDQRFRLRVHQRLVNMPLVGTMLRAGDSARLASTLGILGRSGVPLVDALFIAAQVVGNLAVRNAVKNAAAKVREGGSLS
RALDASGYFPPMLVQMIASGEASGELDNMLTRAADYQERELSSTIGTMVGLLGPIMLLVMAGVVVMIVLSVMLPIMQMNN
LLAG

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=400, Percent_Identity=35.5, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI1786295, Length=402, Percent_Identity=23.134328358209, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44104; Mature: 43972

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFEYRSLDHRGKINKGTLEADSARQVRQQLRDKGWVPLEVNEANDSSSQGMGRFAGSG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCC
KINGAEQALITRQLATLLKSGLPVEQALSAVSKQAANDRIERIMLAVRAKVREGYSLAHS
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FESFPRAFPEMYRATVAAGEQSGHLEQVLEQLADYLETRHDTGRSVAQAMIYPAFIMVFA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SIVIMLMMTFVVPKLVAVFEGRDQALPLLTRIVMAMSDFARGWGWLVVLLIVVAVVVFMR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMRDQRFRLRVHQRLVNMPLVGTMLRAGDSARLASTLGILGRSGVPLVDALFIAAQVVGN
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAVRNAVKNAAAKVREGGSLSRALDASGYFPPMLVQMIASGEASGELDNMLTRAADYQER
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ELSSTIGTMVGLLGPIMLLVMAGVVVMIVLSVMLPIMQMNNLLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFEYRSLDHRGKINKGTLEADSARQVRQQLRDKGWVPLEVNEANDSSSQGMGRFAGSG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]