| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is djlA [H]
Identifier: 110834095
GI number: 110834095
Start: 1405250
End: 1406092
Strand: Direct
Name: djlA [H]
Synonym: ABO_1234
Alternate gene names: 110834095
Gene position: 1405250-1406092 (Clockwise)
Preceding gene: 110834094
Following gene: 110834096
Centisome position: 45.04
GC content: 53.02
Gene sequence:
>843_bases GTGATGCAATTCAATTGGGGTGGGAAGATCATCCTTGGCCTGCTCGGCATGCTTGTGGGTGGGCCCGTTGGCCTGGGCAT AGGCTTGCTGATTGGACATATGCTCGATAAAGGCACCGAGCGAGTGCAGACGTTTAATCCATTTCGCCCCTATGGGCCAG GCGAACAGTCACAAATTCAGCGGGCTTTGTTCGATACCGTGTTTTCTATCATGGGGCATCTTGCGAAGGCGGATGGTCGG GTTAGCGAGGACGAAATTGCCCAGGCTCGAGCGGTAATGGACCGCATGCAGTTGTCAGAAGAACAGCGCAAGCAAGCGAT TGCCCTATTCAATCAAGGCAAGGAGGATAATTTTCCTTTGGATCAGGTCGTGGCAGCATTCGCGACAACCGTTAAACACC GTAAACAGTTGATTCTGGTATTGCTGGAAATCTTGCTACAGACCGCGCTGGCAGACGATGAGCTGGACCCTGCAGAGGAA GCGATTCTAGTGAGAGTGGCCGAAGGCTTGGGGGTGCCGCGAGCTCAGTTTCAGCAGATCCTTAATATGTTGCTGGCACA GGCTCAGTTCTCCGGTAGCCGTGCCGGCGGCCATTCCTACCAGGGGCAGCCAGCAGGGCCGTCTCGACCGTCCCTGTCCC AGGCGTATAAGGTCTTGGGTATCACTGACAGCGCCAGTAATCAGGAAGTTAAAAAAACCTATCGCAAGTTGATGAGCCAG AATCATCCGGACAAGTTGGCGGCCAAAGGTGTACCGGAAGAAATGATTCGGGTAGCCACGCAAAAGACCGCCGAAATCAG TAAAGCCTACGAAATGATCAAAGAACATCGCGGTTTTAAATAA
Upstream 100 bases:
>100_bases TCGATTCCTTGGACTATGCAGGATGGGTAAGTGCGGAGTATCGACCGTTGACAGATACGGCAACCAGCCTGGGCTGGTTT AACGCAACAAAACAGGAGCC
Downstream 100 bases:
>100_bases ACAACGCCGTAGGTTTAACGCAAAATGCAGCACGCGCCGATTCGCGGAGCCGCTGCCAGGCTTCCCAGTAGGCGAGTTGG TAGCGCAGCCGATCCGGGAC
Product: dnaJ-like protein DjlA
Products: NA
Alternate protein names: Mucoidy activation protein mucZ [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK
Sequences:
>Translated_280_residues MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK >Mature_280_residues MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK
Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cell inner membrane; Single-pass type III membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786241, Length=279, Percent_Identity=41.5770609318996, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 - InterPro: IPR007791 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]
EC number: NA
Molecular weight: Translated: 30766; Mature: 30766
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQ CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RALFDTVFSIMGHLAKADGRVSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEEAILVRVAEGLGVPRAQFQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQ CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RALFDTVFSIMGHLAKADGRVSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEEAILVRVAEGLGVPRAQFQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7635811; 12704232 [H]