Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is djlA [H]

Identifier: 110834095

GI number: 110834095

Start: 1405250

End: 1406092

Strand: Direct

Name: djlA [H]

Synonym: ABO_1234

Alternate gene names: 110834095

Gene position: 1405250-1406092 (Clockwise)

Preceding gene: 110834094

Following gene: 110834096

Centisome position: 45.04

GC content: 53.02

Gene sequence:

>843_bases
GTGATGCAATTCAATTGGGGTGGGAAGATCATCCTTGGCCTGCTCGGCATGCTTGTGGGTGGGCCCGTTGGCCTGGGCAT
AGGCTTGCTGATTGGACATATGCTCGATAAAGGCACCGAGCGAGTGCAGACGTTTAATCCATTTCGCCCCTATGGGCCAG
GCGAACAGTCACAAATTCAGCGGGCTTTGTTCGATACCGTGTTTTCTATCATGGGGCATCTTGCGAAGGCGGATGGTCGG
GTTAGCGAGGACGAAATTGCCCAGGCTCGAGCGGTAATGGACCGCATGCAGTTGTCAGAAGAACAGCGCAAGCAAGCGAT
TGCCCTATTCAATCAAGGCAAGGAGGATAATTTTCCTTTGGATCAGGTCGTGGCAGCATTCGCGACAACCGTTAAACACC
GTAAACAGTTGATTCTGGTATTGCTGGAAATCTTGCTACAGACCGCGCTGGCAGACGATGAGCTGGACCCTGCAGAGGAA
GCGATTCTAGTGAGAGTGGCCGAAGGCTTGGGGGTGCCGCGAGCTCAGTTTCAGCAGATCCTTAATATGTTGCTGGCACA
GGCTCAGTTCTCCGGTAGCCGTGCCGGCGGCCATTCCTACCAGGGGCAGCCAGCAGGGCCGTCTCGACCGTCCCTGTCCC
AGGCGTATAAGGTCTTGGGTATCACTGACAGCGCCAGTAATCAGGAAGTTAAAAAAACCTATCGCAAGTTGATGAGCCAG
AATCATCCGGACAAGTTGGCGGCCAAAGGTGTACCGGAAGAAATGATTCGGGTAGCCACGCAAAAGACCGCCGAAATCAG
TAAAGCCTACGAAATGATCAAAGAACATCGCGGTTTTAAATAA

Upstream 100 bases:

>100_bases
TCGATTCCTTGGACTATGCAGGATGGGTAAGTGCGGAGTATCGACCGTTGACAGATACGGCAACCAGCCTGGGCTGGTTT
AACGCAACAAAACAGGAGCC

Downstream 100 bases:

>100_bases
ACAACGCCGTAGGTTTAACGCAAAATGCAGCACGCGCCGATTCGCGGAGCCGCTGCCAGGCTTCCCAGTAGGCGAGTTGG
TAGCGCAGCCGATCCGGGAC

Product: dnaJ-like protein DjlA

Products: NA

Alternate protein names: Mucoidy activation protein mucZ [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR
VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE
AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ
NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK

Sequences:

>Translated_280_residues
MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR
VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE
AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ
NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK
>Mature_280_residues
MMQFNWGGKIILGLLGMLVGGPVGLGIGLLIGHMLDKGTERVQTFNPFRPYGPGEQSQIQRALFDTVFSIMGHLAKADGR
VSEDEIAQARAVMDRMQLSEEQRKQAIALFNQGKEDNFPLDQVVAAFATTVKHRKQLILVLLEILLQTALADDELDPAEE
AILVRVAEGLGVPRAQFQQILNMLLAQAQFSGSRAGGHSYQGQPAGPSRPSLSQAYKVLGITDSASNQEVKKTYRKLMSQ
NHPDKLAAKGVPEEMIRVATQKTAEISKAYEMIKEHRGFK

Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cell inner membrane; Single-pass type III membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Escherichia coli, GI1786241, Length=279, Percent_Identity=41.5770609318996, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR007791
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]

EC number: NA

Molecular weight: Translated: 30766; Mature: 30766

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7635811; 12704232 [H]