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The map label for this gene is yafS [H]

Identifier: 110834084

GI number: 110834084

Start: 1393676

End: 1394452

Strand: Direct

Name: yafS [H]

Synonym: ABO_1223

Alternate gene names: 110834084

Gene position: 1393676-1394452 (Clockwise)

Preceding gene: 110834075

Following gene: 110834085

Centisome position: 44.67

GC content: 55.6

Gene sequence:

>777_bases
ATGCAGCTACCTCCACTCAACCGTATTTCGTTTAATACCTCTTCCGGTGAATTGGGCAGAGGCTTTGATGAATGGCTAGA
CAGTGAGCCGGGGCAGGCGTTGTTGAATGACGAAAAGGCCATGCTGACTGATTGGCTTCGCAGTCAAGCTGGGCAGCGCG
CGGTGGCGGTTTATTCTAGCGGCGGTCGTGATCTTATGTCCGAATCGCCGTTGCGTTGGCAAACCAGTATTGCGCCACCC
GGTTTTACCGGTGTGAAGCTATATTCACGGCTGGATTTACTGCCGATTGCAAAAAATAGTGTAGATGTGTTGTTGCTTCA
CCATACCATGGACTTCTCCGCTGACCCTCATCAGGTATTACGTGAGGCTGCCCGCTGTATGGCTCCCGGCGGGAAGATAG
CGATCATTGGCTTTCATCCACTCAGTATTATGGGATTGGCACGCTGGCTGCTTTGGTGGAAGTCACCGGGTTGGATGGGG
CGCTACTACCGGCCCAACCGCTTAACGGATTGGTTGCAGGTTCTAGGATTTGAGGTCGATGGTATGGCCAGTGGCTTCTA
TACTATGCCGTTGTCCGACCGTGGTCGCAGTCGAGTGCGGATGCTTGACTGGCTGGGTCGCTATTTATGGCCTCGCCACG
GTAATACGTACCTCCTGGTGGCGAGGAAGCGGGCGGGTGTTGTTCGTCCGTTGGCCAGCCGACAACGCAGAGTGCCGCGC
AATGCTGTGGTGCCAGTACCAGTGGCCCGCTGGGGCCAACAGAACAGGGAGCCTTGA

Upstream 100 bases:

>100_bases
GTCATGTGTGTTACGCTCCTGTTTACGTGCTATAGATTCTGCACGGGTTCGGTGCTTTATAAGCATGAATTAACATTCAT
GAATGAAGAGATTGTCCGCC

Downstream 100 bases:

>100_bases
GTCTTTGAAAAATGTGATTATCTACACTGACGGCGCTTGCCGTGGTAATCCCGGTCCGGGTGGTTGGGGCGCTATTCTTC
TCTATGGTGATAAGGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MQLPPLNRISFNTSSGELGRGFDEWLDSEPGQALLNDEKAMLTDWLRSQAGQRAVAVYSSGGRDLMSESPLRWQTSIAPP
GFTGVKLYSRLDLLPIAKNSVDVLLLHHTMDFSADPHQVLREAARCMAPGGKIAIIGFHPLSIMGLARWLLWWKSPGWMG
RYYRPNRLTDWLQVLGFEVDGMASGFYTMPLSDRGRSRVRMLDWLGRYLWPRHGNTYLLVARKRAGVVRPLASRQRRVPR
NAVVPVPVARWGQQNREP

Sequences:

>Translated_258_residues
MQLPPLNRISFNTSSGELGRGFDEWLDSEPGQALLNDEKAMLTDWLRSQAGQRAVAVYSSGGRDLMSESPLRWQTSIAPP
GFTGVKLYSRLDLLPIAKNSVDVLLLHHTMDFSADPHQVLREAARCMAPGGKIAIIGFHPLSIMGLARWLLWWKSPGWMG
RYYRPNRLTDWLQVLGFEVDGMASGFYTMPLSDRGRSRVRMLDWLGRYLWPRHGNTYLLVARKRAGVVRPLASRQRRVPR
NAVVPVPVARWGQQNREP
>Mature_258_residues
MQLPPLNRISFNTSSGELGRGFDEWLDSEPGQALLNDEKAMLTDWLRSQAGQRAVAVYSSGGRDLMSESPLRWQTSIAPP
GFTGVKLYSRLDLLPIAKNSVDVLLLHHTMDFSADPHQVLREAARCMAPGGKIAIIGFHPLSIMGLARWLLWWKSPGWMG
RYYRPNRLTDWLQVLGFEVDGMASGFYTMPLSDRGRSRVRMLDWLGRYLWPRHGNTYLLVARKRAGVVRPLASRQRRVPR
NAVVPVPVARWGQQNREP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=136, Percent_Identity=38.9705882352941, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29275; Mature: 29275

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPLNRISFNTSSGELGRGFDEWLDSEPGQALLNDEKAMLTDWLRSQAGQRAVAVYSS
CCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCEEEEEEEC
GGRDLMSESPLRWQTSIAPPGFTGVKLYSRLDLLPIAKNSVDVLLLHHTMDFSADPHQVL
CCCHHHCCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCHHHHH
REAARCMAPGGKIAIIGFHPLSIMGLARWLLWWKSPGWMGRYYRPNRLTDWLQVLGFEVD
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
GMASGFYTMPLSDRGRSRVRMLDWLGRYLWPRHGNTYLLVARKRAGVVRPLASRQRRVPR
CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCC
NAVVPVPVARWGQQNREP
CCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQLPPLNRISFNTSSGELGRGFDEWLDSEPGQALLNDEKAMLTDWLRSQAGQRAVAVYSS
CCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCEEEEEEEC
GGRDLMSESPLRWQTSIAPPGFTGVKLYSRLDLLPIAKNSVDVLLLHHTMDFSADPHQVL
CCCHHHCCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCHHHHH
REAARCMAPGGKIAIIGFHPLSIMGLARWLLWWKSPGWMGRYYRPNRLTDWLQVLGFEVD
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
GMASGFYTMPLSDRGRSRVRMLDWLGRYLWPRHGNTYLLVARKRAGVVRPLASRQRRVPR
CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCC
NAVVPVPVARWGQQNREP
CCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]