Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834037

Identifier: 110834037

GI number: 110834037

Start: 1337431

End: 1337874

Strand: Direct

Name: 110834037

Synonym: ABO_1176

Alternate gene names: NA

Gene position: 1337431-1337874 (Clockwise)

Preceding gene: 110834036

Following gene: 110834038

Centisome position: 42.86

GC content: 52.03

Gene sequence:

>444_bases
ATGAGTGATAAACCCAAACGCCCGCTGCGCGAGGAGTATGGCTACCTTTGTCCGGTGGATAGTCGCTGGAGCGATAACGA
TATCTACGGTCACATTAACAACGTGGTGTATTACAGCTATTTTGACTCCACCATTAATCGTTACTTAATCAACGAAGGTG
GCTTGGATATCGATGAAGGCGAGCATATTGCCTATGTGGTCAGCTCTGGCTGTGACTATCTGGAAGCGGCAGCGTATCCC
GAATCGCTGGTGGTGGGAATGAAGGTGGACAAGCTGGGAAACAGTTCTGTGCGTTATGGCCTGGCATTGTTCGGCGGCGA
AGGTGCGGCCAAGGCCACCGGTTTTGTGGTGCATGTATTTGTGAATCGTGCAACGGGACGGCCTGTGGCAATCCCTGATG
CCCTGCGCGAAGCGTTAGCAAGGTTGGCTATGATCGAGGTATAA

Upstream 100 bases:

>100_bases
AGTGACTGAGGCAGATGCGTTGAATATTTATAAAGCAGTGTATTGATAAAAGAGGCGCAGCGCAGTCCTTAACACGCGCT
GCTTTTGCAAGGATAAACCC

Downstream 100 bases:

>100_bases
AGCAGTCATACCGACAGTAAAAAAGTAGCGAGCCCATAGCCATAATATAGGTCGACTTAGGCGTAGCCGTAAGCCGACAC
AGTGGCTCTAAATTTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase; Thioesterase Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSDKPKRPLREEYGYLCPVDSRWSDNDIYGHINNVVYYSYFDSTINRYLINEGGLDIDEGEHIAYVVSSGCDYLEAAAYP
ESLVVGMKVDKLGNSSVRYGLALFGGEGAAKATGFVVHVFVNRATGRPVAIPDALREALARLAMIEV

Sequences:

>Translated_147_residues
MSDKPKRPLREEYGYLCPVDSRWSDNDIYGHINNVVYYSYFDSTINRYLINEGGLDIDEGEHIAYVVSSGCDYLEAAAYP
ESLVVGMKVDKLGNSSVRYGLALFGGEGAAKATGFVVHVFVNRATGRPVAIPDALREALARLAMIEV
>Mature_146_residues
SDKPKRPLREEYGYLCPVDSRWSDNDIYGHINNVVYYSYFDSTINRYLINEGGLDIDEGEHIAYVVSSGCDYLEAAAYPE
SLVVGMKVDKLGNSSVRYGLALFGGEGAAKATGFVVHVFVNRATGRPVAIPDALREALARLAMIEV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16187; Mature: 16056

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKPKRPLREEYGYLCPVDSRWSDNDIYGHINNVVYYSYFDSTINRYLINEGGLDIDEG
CCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEHHHHHHHEEECCCCCCCCCC
EHIAYVVSSGCDYLEAAAYPESLVVGMKVDKLGNSSVRYGLALFGGEGAAKATGFVVHVF
CEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEE
VNRATGRPVAIPDALREALARLAMIEV
EECCCCCCEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDKPKRPLREEYGYLCPVDSRWSDNDIYGHINNVVYYSYFDSTINRYLINEGGLDIDEG
CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEHHHHHHHEEECCCCCCCCCC
EHIAYVVSSGCDYLEAAAYPESLVVGMKVDKLGNSSVRYGLALFGGEGAAKATGFVVHVF
CEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEE
VNRATGRPVAIPDALREALARLAMIEV
EECCCCCCEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA