Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834031

Identifier: 110834031

GI number: 110834031

Start: 1330872

End: 1331783

Strand: Direct

Name: 110834031

Synonym: ABO_1170

Alternate gene names: NA

Gene position: 1330872-1331783 (Clockwise)

Preceding gene: 110834030

Following gene: 110834032

Centisome position: 42.65

GC content: 52.63

Gene sequence:

>912_bases
ATGATTCGACCCGGTATTTTTTTTCGTGGCATGGCCATGGGAACGGCTGATGTGGTGCCCGGTGTTTCCGGTGGTACTCT
GGCGTTGATTACCGGTATCTATGAAGAGCTGATCAATACTCTGGGGGGGATCACTCCCCGGTTGCTGGTCGTGTGGCGCC
AGCAAGGTTTCGTTGCTGTCTGGCAGCAGGCTAATCTGACTTTTCTTTTTACCTTGCTGGCCGGTATTTTTACCAGTATC
GCGGTGTTGGCACGGCTGATTACCTGGCTTTTGGAAACCCATCCAGTACCGATTTGGGCGTTTTTTAGCGGTTTGATCCT
GGCCAGTATCCCGCTGGTTTTAAAACCCTTGCAGCAGCGCGGGGCAATACAGATTGGTGCCTTTTTTCTGGGCACAGTGG
TAGCGGTGGCGATTGGTTTAGCGCCGGCATTGTCCGCGGCAGGTAGCGGAGCATTGGTTTTTTTCTTCAGCGGCATGCTG
GCTATTTGCGCCATGATTCTGCCCGGCATTTCGGGCAGTTTTATTCTTCTTTTACTGGGCATGTATCAACCTGTGCTTGA
AGCTGTGAAGCAGGCGCAGTTTTCATTACTGCTGGCATTTATGGCGGGTTGTGCGGTTGGCCTGTTGAGCTTTGTACATG
TGCTCAAGTGGACGCTACAGCGTTTCCATGACACCGTCATGGCGCTATTAGCAGGCTTTATGGCCGGTTCGTTGTTGAAG
CTGTGGCCGTGGCGAATCAGTGGCGAGCAGGGTATTTCCGATCAATGGCTGTGGCCAGCACAGTATGCCCAGGTTACGGG
CCAGGGGGCGCAATTACCCCTATCGTTGATAATGTTGGTTGTGGCTGCAGTAGTGGTCTGGTTACTTTATCGGGCTGCTC
CGGTACATAATGTTGCACAAGCTAAGGACTGA

Upstream 100 bases:

>100_bases
TACAAGGCGCGTTGAAGCTCGTTGTTTGCTTCTTCAGCGGTCGAGAAAATTCATTCCCACCCCGCATTGATGTGTGCAGC
GTGATGCATGAGGCGTAAAG

Downstream 100 bases:

>100_bases
ATGCTGACTCAGTATGGGTTACGGTGCAGTAGGCACTTCAAATTCAGTTTCCTGGTAACGGGGAGGGTTAATGGCAGTAA
CAATTCACACAGGCACTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIRPGIFFRGMAMGTADVVPGVSGGTLALITGIYEELINTLGGITPRLLVVWRQQGFVAVWQQANLTFLFTLLAGIFTSI
AVLARLITWLLETHPVPIWAFFSGLILASIPLVLKPLQQRGAIQIGAFFLGTVVAVAIGLAPALSAAGSGALVFFFSGML
AICAMILPGISGSFILLLLGMYQPVLEAVKQAQFSLLLAFMAGCAVGLLSFVHVLKWTLQRFHDTVMALLAGFMAGSLLK
LWPWRISGEQGISDQWLWPAQYAQVTGQGAQLPLSLIMLVVAAVVVWLLYRAAPVHNVAQAKD

Sequences:

>Translated_303_residues
MIRPGIFFRGMAMGTADVVPGVSGGTLALITGIYEELINTLGGITPRLLVVWRQQGFVAVWQQANLTFLFTLLAGIFTSI
AVLARLITWLLETHPVPIWAFFSGLILASIPLVLKPLQQRGAIQIGAFFLGTVVAVAIGLAPALSAAGSGALVFFFSGML
AICAMILPGISGSFILLLLGMYQPVLEAVKQAQFSLLLAFMAGCAVGLLSFVHVLKWTLQRFHDTVMALLAGFMAGSLLK
LWPWRISGEQGISDQWLWPAQYAQVTGQGAQLPLSLIMLVVAAVVVWLLYRAAPVHNVAQAKD
>Mature_303_residues
MIRPGIFFRGMAMGTADVVPGVSGGTLALITGIYEELINTLGGITPRLLVVWRQQGFVAVWQQANLTFLFTLLAGIFTSI
AVLARLITWLLETHPVPIWAFFSGLILASIPLVLKPLQQRGAIQIGAFFLGTVVAVAIGLAPALSAAGSGALVFFFSGML
AICAMILPGISGSFILLLLGMYQPVLEAVKQAQFSLLLAFMAGCAVGLLSFVHVLKWTLQRFHDTVMALLAGFMAGSLLK
LWPWRISGEQGISDQWLWPAQYAQVTGQGAQLPLSLIMLVVAAVVVWLLYRAAPVHNVAQAKD

Specific function: Unknown

COG id: COG2035

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32501; Mature: 32501

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPGIFFRGMAMGTADVVPGVSGGTLALITGIYEELINTLGGITPRLLVVWRQQGFVAV
CCCCCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEH
WQQANLTFLFTLLAGIFTSIAVLARLITWLLETHPVPIWAFFSGLILASIPLVLKPLQQR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GAIQIGAFFLGTVVAVAIGLAPALSAAGSGALVFFFSGMLAICAMILPGISGSFILLLLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MYQPVLEAVKQAQFSLLLAFMAGCAVGLLSFVHVLKWTLQRFHDTVMALLAGFMAGSLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWPWRISGEQGISDQWLWPAQYAQVTGQGAQLPLSLIMLVVAAVVVWLLYRAAPVHNVAQ
HCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
AKD
CCC
>Mature Secondary Structure
MIRPGIFFRGMAMGTADVVPGVSGGTLALITGIYEELINTLGGITPRLLVVWRQQGFVAV
CCCCCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEH
WQQANLTFLFTLLAGIFTSIAVLARLITWLLETHPVPIWAFFSGLILASIPLVLKPLQQR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GAIQIGAFFLGTVVAVAIGLAPALSAAGSGALVFFFSGMLAICAMILPGISGSFILLLLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MYQPVLEAVKQAQFSLLLAFMAGCAVGLLSFVHVLKWTLQRFHDTVMALLAGFMAGSLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWPWRISGEQGISDQWLWPAQYAQVTGQGAQLPLSLIMLVVAAVVVWLLYRAAPVHNVAQ
HCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
AKD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA