Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is rec2 [H]

Identifier: 110833913

GI number: 110833913

Start: 1192781

End: 1195009

Strand: Direct

Name: rec2 [H]

Synonym: ABO_1052

Alternate gene names: 110833913

Gene position: 1192781-1195009 (Clockwise)

Preceding gene: 110833911

Following gene: 110833914

Centisome position: 38.23

GC content: 57.56

Gene sequence:

>2229_bases
ATGCGAATGTGGTTAACGACCGCCGCTATCGTGGCGGGTTGCTGGCTGGGTGTATTGTGGCCACTACTGGTGTTAGCGGT
TGTTGCAGCGGCTGGGATGTGGCGCTGTCGGGCCCTGTGGCTTGTGTGGTTAATAATTGGTTACGGTTTTGGCGTTTGGC
AGCTGAATATAGGATTGATAAAGCGTCTGCCTGCTGATCAGGATCGGGCCGTAGTTAGCCTGCAGGGCGAAGTAGTGGAT
GTCCCGGTGACTCATCGTGAGTTTCGTTTTGGTCGCTGGCAATGGCGCCAGCAAATACTTTTTTTGGTGTGGGGAAGCGA
GGAGTGGCCTGGAAAGCACCAAGTCGTGCTTAATAGCTATGCGCCGCCTGTGCTGCTGGGTGCGGGCGATCGGGTGAGGC
TAACGGCGGAACTGAAGGTGCCGCGTGGCCTGTACAACCGCTTCGGTCCTGATCGCAGCCGTTCTGACCTCTCCGCGGGG
ATAGATGCCCGCGGTACCCTTAAGCAGATATCAGTGGAGGGGAATAACCGCGGTATTGCTGCCTGGCGTGAGCAGTTGTC
TTACCGTGTGGAGGAGCGGGTCAGTGGTTCGCCCCTAGGCCAAGCAGTACTTCCTGCTCTGATCGTTGGCAATCGCTCCG
GGCTGGAGGCGTCGCTGTGGCAAGCCTTCCAGGTAACGGGAGGCGCCCATCTATTGGCTATTTCCGGCCTGCATATCGCT
ATTGTGGCCGGCTGGTTCTGGTGGTTGGGCCGGGTGGTGTTTGCCCCGGTTCTTCAGGCGTTGATGCCGGTATTGCGGCG
ATACTCTCAGCAGCATCTGGCTTGGGTGCCAGCTCTATTAGCGGCAACGGGGTATGCCGCATTGGCGGGATTTAGCCTTC
CTACGGTGCGGGCATTGGTCATGCTGATAGTGGTGGCGTTGGCGCAGTGGTGGCGAGTGCCGATTTCGCTGGGGCGAGCA
TTGGCGTTGGCCTTGCTGGTGGTACTCATGATCATGCCGCTGGCGGCGCTGTCAGAAAGCCTGTGGTTATCCTTCGGGGC
GGTGGCATTTATTGCCATGTTAACCCGCAGTCATGGTTCTTGGCGGTTAATCATACTGCTGCCTGTGGTAATGACGATGG
CCAGCGCTGGGTTGTTTCATCAATGGACACCCAGCGCACCGCTGGCCAATCTTATATTGGTTCCCTTATACACTGTGTTG
GTCATCCCGGCAGCCTTGCTCGGGGCGTTGCTGGACCAAACTTGGTTGCTGCAAGCGGCTGCGACAGGCGTGGAATTGTC
TGTGTGGGTGATGACTTGGTTGGCGAACCAGGGGATACCGTCATGGCTCATGCTTCCTTCTACAGTGTCGGGCATTGTGT
TGATGTTTGGCTTGATGCTTCTGCTGATGCCATTTGTTCCTTTTCCCAGACGATTGTTGCCGTTCTGTCTATTACCCTGG
CTGACACAGCAACCAGAGCCTCTGGCGTCGGGGGAGTGGTCGCTGACAGCTTTCGATGTGGGGCAGGGGCTAGCGGTGGC
AATACGAACCCGCGAGCATTTGCTGATCTATGACGCTGGGCCGTCCTGGCCGGGTGGCAGTGTTGCGGCACAGAGCATAT
CACCGTGGCTGTCTGTCACGGGGCAGAAGGTGGATCGCATGCTGATTAGTCATGGTGACAATGATCATGCTGGTGGCTTG
GTAGACTTGCCGTCTGCGGTTGCCTTATTCAGTGGTGAGCCGCATCGAGTACCCGGTAGCCATTTTTGTCGGGCGGGGGA
TCGTTGGTCGTGGGATGGCGTCTCGTTCACGGTACTGTGGCCCCGAGAAACGGGTCTAAAGAGTAATGCGGCCAGTTGTG
TATTGCATGTCGATGGTCCCTTTGGGTCCGTGTTGCTGCCCGGCGATATTGGCGTTCAGCAGGAATATCATTTGCTTGGA
ACGTTGCCTTCGGTGGACCTGCTGGTGTTGGGGCACCATGGAAGTCAGTCCAGTACTAGCGCCGCGCTACTGCGGCAGTT
ACAGCCGCGCTTTGCTATCGTCAGTGCGGGTTACCGGAACCGGTTTAATCATCCTCATCCAGCGGTGTTGGGTCGGCTGG
ATAGCGCTGGCATCACCGTTCTGCGTACCGACAGAGATGGCATGATTGTGTTTCGGCAGGGGGGCGCAGATAATGTCCGG
CTTATAACAAAATGGCGGCAAGCGTATGCCCGGCCTTGGCATGGGCCGGCCGTTTGGCGTCTCTGGTAA

Upstream 100 bases:

>100_bases
GCATACTGCCACAAAGGCGAGGAAAGGAATTGTTGTTCCTATAGCAGCGCTGATTTCGCCGTTTACATGGGGTTGTGATA
GATAAAACCGCGGAGCAAGG

Downstream 100 bases:

>100_bases
TGTGATTTGTGCGAATGGGGAGAAGTTAAGGTGCAGGATCTTGTGCAGTCCGGAGGCTGGATGATGCTTCCGATCTTGAT
CTGTTCGGTGGTGGCGTTGG

Product: DNA internalization-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 742; Mature: 742

Protein sequence:

>742_residues
MRMWLTTAAIVAGCWLGVLWPLLVLAVVAAAGMWRCRALWLVWLIIGYGFGVWQLNIGLIKRLPADQDRAVVSLQGEVVD
VPVTHREFRFGRWQWRQQILFLVWGSEEWPGKHQVVLNSYAPPVLLGAGDRVRLTAELKVPRGLYNRFGPDRSRSDLSAG
IDARGTLKQISVEGNNRGIAAWREQLSYRVEERVSGSPLGQAVLPALIVGNRSGLEASLWQAFQVTGGAHLLAISGLHIA
IVAGWFWWLGRVVFAPVLQALMPVLRRYSQQHLAWVPALLAATGYAALAGFSLPTVRALVMLIVVALAQWWRVPISLGRA
LALALLVVLMIMPLAALSESLWLSFGAVAFIAMLTRSHGSWRLIILLPVVMTMASAGLFHQWTPSAPLANLILVPLYTVL
VIPAALLGALLDQTWLLQAAATGVELSVWVMTWLANQGIPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPW
LTQQPEPLASGEWSLTAFDVGQGLAVAIRTREHLLIYDAGPSWPGGSVAAQSISPWLSVTGQKVDRMLISHGDNDHAGGL
VDLPSAVALFSGEPHRVPGSHFCRAGDRWSWDGVSFTVLWPRETGLKSNAASCVLHVDGPFGSVLLPGDIGVQQEYHLLG
TLPSVDLLVLGHHGSQSSTSAALLRQLQPRFAIVSAGYRNRFNHPHPAVLGRLDSAGITVLRTDRDGMIVFRQGGADNVR
LITKWRQAYARPWHGPAVWRLW

Sequences:

>Translated_742_residues
MRMWLTTAAIVAGCWLGVLWPLLVLAVVAAAGMWRCRALWLVWLIIGYGFGVWQLNIGLIKRLPADQDRAVVSLQGEVVD
VPVTHREFRFGRWQWRQQILFLVWGSEEWPGKHQVVLNSYAPPVLLGAGDRVRLTAELKVPRGLYNRFGPDRSRSDLSAG
IDARGTLKQISVEGNNRGIAAWREQLSYRVEERVSGSPLGQAVLPALIVGNRSGLEASLWQAFQVTGGAHLLAISGLHIA
IVAGWFWWLGRVVFAPVLQALMPVLRRYSQQHLAWVPALLAATGYAALAGFSLPTVRALVMLIVVALAQWWRVPISLGRA
LALALLVVLMIMPLAALSESLWLSFGAVAFIAMLTRSHGSWRLIILLPVVMTMASAGLFHQWTPSAPLANLILVPLYTVL
VIPAALLGALLDQTWLLQAAATGVELSVWVMTWLANQGIPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPW
LTQQPEPLASGEWSLTAFDVGQGLAVAIRTREHLLIYDAGPSWPGGSVAAQSISPWLSVTGQKVDRMLISHGDNDHAGGL
VDLPSAVALFSGEPHRVPGSHFCRAGDRWSWDGVSFTVLWPRETGLKSNAASCVLHVDGPFGSVLLPGDIGVQQEYHLLG
TLPSVDLLVLGHHGSQSSTSAALLRQLQPRFAIVSAGYRNRFNHPHPAVLGRLDSAGITVLRTDRDGMIVFRQGGADNVR
LITKWRQAYARPWHGPAVWRLW
>Mature_742_residues
MRMWLTTAAIVAGCWLGVLWPLLVLAVVAAAGMWRCRALWLVWLIIGYGFGVWQLNIGLIKRLPADQDRAVVSLQGEVVD
VPVTHREFRFGRWQWRQQILFLVWGSEEWPGKHQVVLNSYAPPVLLGAGDRVRLTAELKVPRGLYNRFGPDRSRSDLSAG
IDARGTLKQISVEGNNRGIAAWREQLSYRVEERVSGSPLGQAVLPALIVGNRSGLEASLWQAFQVTGGAHLLAISGLHIA
IVAGWFWWLGRVVFAPVLQALMPVLRRYSQQHLAWVPALLAATGYAALAGFSLPTVRALVMLIVVALAQWWRVPISLGRA
LALALLVVLMIMPLAALSESLWLSFGAVAFIAMLTRSHGSWRLIILLPVVMTMASAGLFHQWTPSAPLANLILVPLYTVL
VIPAALLGALLDQTWLLQAAATGVELSVWVMTWLANQGIPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPW
LTQQPEPLASGEWSLTAFDVGQGLAVAIRTREHLLIYDAGPSWPGGSVAAQSISPWLSVTGQKVDRMLISHGDNDHAGGL
VDLPSAVALFSGEPHRVPGSHFCRAGDRWSWDGVSFTVLWPRETGLKSNAASCVLHVDGPFGSVLLPGDIGVQQEYHLLG
TLPSVDLLVLGHHGSQSSTSAALLRQLQPRFAIVSAGYRNRFNHPHPAVLGRLDSAGITVLRTDRDGMIVFRQGGADNVR
LITKWRQAYARPWHGPAVWRLW

Specific function: Essential for natural transformation. Could be a transporter involved in DNA uptake [H]

COG id: COG2333

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ComEC, H.influenzae REC2, and E.coli YcaI [H]

Homologues:

Organism=Escherichia coli, GI87081801, Length=641, Percent_Identity=28.393135725429, Blast_Score=157, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 81343; Mature: 81343

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMWLTTAAIVAGCWLGVLWPLLVLAVVAAAGMWRCRALWLVWLIIGYGFGVWQLNIGLI
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH
KRLPADQDRAVVSLQGEVVDVPVTHREFRFGRWQWRQQILFLVWGSEEWPGKHQVVLNSY
HCCCCCCCCEEEEECCCEEECCCCHHHHHCHHHHHCCEEEEEEECCCCCCCCCEEEEECC
APPVLLGAGDRVRLTAELKVPRGLYNRFGPDRSRSDLSAGIDARGTLKQISVEGNNRGIA
CCCEEECCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCHH
AWREQLSYRVEERVSGSPLGQAVLPALIVGNRSGLEASLWQAFQVTGGAHLLAISGLHIA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
IVAGWFWWLGRVVFAPVLQALMPVLRRYSQQHLAWVPALLAATGYAALAGFSLPTVRALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MLIVVALAQWWRVPISLGRALALALLVVLMIMPLAALSESLWLSFGAVAFIAMLTRSHGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRLIILLPVVMTMASAGLFHQWTPSAPLANLILVPLYTVLVIPAALLGALLDQTWLLQAA
EEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGVELSVWVMTWLANQGIPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPW
HCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LTQQPEPLASGEWSLTAFDVGQGLAVAIRTREHLLIYDAGPSWPGGSVAAQSISPWLSVT
HCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHCCHHHHHH
GQKVDRMLISHGDNDHAGGLVDLPSAVALFSGEPHRVPGSHFCRAGDRWSWDGVSFTVLW
HHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEE
PRETGLKSNAASCVLHVDGPFGSVLLPGDIGVQQEYHLLGTLPSVDLLVLGHHGSQSSTS
CCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHEECCCCCEEEEEECCCCCCHHH
AALLRQLQPRFAIVSAGYRNRFNHPHPAVLGRLDSAGITVLRTDRDGMIVFRQGGADNVR
HHHHHHCCCCEEEEECCHHCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHH
LITKWRQAYARPWHGPAVWRLW
HHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MRMWLTTAAIVAGCWLGVLWPLLVLAVVAAAGMWRCRALWLVWLIIGYGFGVWQLNIGLI
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH
KRLPADQDRAVVSLQGEVVDVPVTHREFRFGRWQWRQQILFLVWGSEEWPGKHQVVLNSY
HCCCCCCCCEEEEECCCEEECCCCHHHHHCHHHHHCCEEEEEEECCCCCCCCCEEEEECC
APPVLLGAGDRVRLTAELKVPRGLYNRFGPDRSRSDLSAGIDARGTLKQISVEGNNRGIA
CCCEEECCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCHH
AWREQLSYRVEERVSGSPLGQAVLPALIVGNRSGLEASLWQAFQVTGGAHLLAISGLHIA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
IVAGWFWWLGRVVFAPVLQALMPVLRRYSQQHLAWVPALLAATGYAALAGFSLPTVRALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MLIVVALAQWWRVPISLGRALALALLVVLMIMPLAALSESLWLSFGAVAFIAMLTRSHGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRLIILLPVVMTMASAGLFHQWTPSAPLANLILVPLYTVLVIPAALLGALLDQTWLLQAA
EEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGVELSVWVMTWLANQGIPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPW
HCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LTQQPEPLASGEWSLTAFDVGQGLAVAIRTREHLLIYDAGPSWPGGSVAAQSISPWLSVT
HCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHCCHHHHHH
GQKVDRMLISHGDNDHAGGLVDLPSAVALFSGEPHRVPGSHFCRAGDRWSWDGVSFTVLW
HHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEE
PRETGLKSNAASCVLHVDGPFGSVLLPGDIGVQQEYHLLGTLPSVDLLVLGHHGSQSSTS
CCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHEECCCCCEEEEEECCCCCCHHH
AALLRQLQPRFAIVSAGYRNRFNHPHPAVLGRLDSAGITVLRTDRDGMIVFRQGGADNVR
HHHHHHCCCCEEEEECCHHCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHH
LITKWRQAYARPWHGPAVWRLW
HHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934834; 8830266 [H]