| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833904
Identifier: 110833904
GI number: 110833904
Start: 1183731
End: 1184885
Strand: Direct
Name: 110833904
Synonym: ABO_1043
Alternate gene names: NA
Gene position: 1183731-1184885 (Clockwise)
Preceding gene: 110833901
Following gene: 110833905
Centisome position: 37.94
GC content: 55.32
Gene sequence:
>1155_bases ATGTTAAAGCTGTTGAAACGTTATAGCCGATTATTCCTGGTCAGTTGGGCTCCACGTTATCAAGGGCAATGGCACGGCTT CTCGTTGCAACGACTGCTGGTGATGCTGGTTTTTTGGCCATCTTTTTTGCTGGTGCAGGCGATTAATGGTATCGGGCTGG GGTTGGATTACCTGCTATTTCCGGGGTTTCGCCGGGTGTCGGTGCGCGAGCCATTATTTGTGATTGGCGTGCCGCGAAGC GGTACCACTTTCCTGCATCGTCTGCTGGCCATGGATTCGCGTTTCACGACGACCGCCCTATGGGAGCTACTGTTCGCCCC CTCGATTACCCAGCGCTATTTCTGGACGGGTATGGCGCGCTTGGATAAGTGGCTAGGCCGGCCGGGGGCTAGACTAGTCT GTTGGTTGGAACGGCGTCTGTTGAGTGGGTTGGATGGTGTGCACAAGACAGGGTTGCTCGATCCGGAAGAGGATTATCTG GGGTTGATCCCCGTATGGGGCTGCTTTCTGCTGGTCCTTGTGGTTCCCGTTCCTTCCCTGTGGCAACTGACGTTTCTGGA CCGCGATGGCAGTGCGGATGAGAAACAGCGATTGATGCAATCCTACCGCCGCTTTGTGCAGCGTCACCTTTACTTTCACG GACAGGGGAAAACCCTGTTATCGAAGAATCCCTCGTTTACCCCGTGGATGGAAACCTTGGCAGAGGCCTTTCCGGATGCC CGTTTTATTGGCTGCCTACGTAGCCCCACGGCGGCGGTGCCATCGCAGGTGAATTCGATCCTGATCGGTGCGCGCCTGTT TGATGGCCGCGACACTACCGCTTACTGGCGGGAAGGGTTTCTAGCAATGCTGGAATACTACTATCTGCATTTGATAGAAG TGGCCGAACAAATGCCGCAACAGCGCCGGGCGTTATCGGTGATGGAGACCCTGGTGCGCGCTCCCAGCGATACCGTGCTG GGTTTTTACCGTCGTTTTGGCTGGCAAGCAGACGCGCATTTCTGTGAGCAGCTGCAGGAGCAAGACCGCAAAGCCAAACA GTACCGTAGTGGCCACCACTACTCACTGGACGCCTTGGGCGTCAGTGATGACGAATTGCTGCAGAGGTTTGGTTGGGTTT ATGAGCGCTTTGGTTTTATCAAACCCGATGGTTAA
Upstream 100 bases:
>100_bases AGATGACAGCGCTGTGACCGAGACACAAGAGATACTGCTGTCATTTTTATGTCTTGGAGCTGTTTTATTGTTTCAACGTT TCTCGCCGCCGAGCTTCACC
Downstream 100 bases:
>100_bases CGCCGCCTCTATGGAAAGTGATCTCCACACCGCAAAGGGGTAGGCGTGTTAGCGTCGCCTGACGCCCGCACAGGTTGTAT GTAGTGTGCAGCCTGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLKLLKRYSRLFLVSWAPRYQGQWHGFSLQRLLVMLVFWPSFLLVQAINGIGLGLDYLLFPGFRRVSVREPLFVIGVPRS GTTFLHRLLAMDSRFTTTALWELLFAPSITQRYFWTGMARLDKWLGRPGARLVCWLERRLLSGLDGVHKTGLLDPEEDYL GLIPVWGCFLLVLVVPVPSLWQLTFLDRDGSADEKQRLMQSYRRFVQRHLYFHGQGKTLLSKNPSFTPWMETLAEAFPDA RFIGCLRSPTAAVPSQVNSILIGARLFDGRDTTAYWREGFLAMLEYYYLHLIEVAEQMPQQRRALSVMETLVRAPSDTVL GFYRRFGWQADAHFCEQLQEQDRKAKQYRSGHHYSLDALGVSDDELLQRFGWVYERFGFIKPDG
Sequences:
>Translated_384_residues MLKLLKRYSRLFLVSWAPRYQGQWHGFSLQRLLVMLVFWPSFLLVQAINGIGLGLDYLLFPGFRRVSVREPLFVIGVPRS GTTFLHRLLAMDSRFTTTALWELLFAPSITQRYFWTGMARLDKWLGRPGARLVCWLERRLLSGLDGVHKTGLLDPEEDYL GLIPVWGCFLLVLVVPVPSLWQLTFLDRDGSADEKQRLMQSYRRFVQRHLYFHGQGKTLLSKNPSFTPWMETLAEAFPDA RFIGCLRSPTAAVPSQVNSILIGARLFDGRDTTAYWREGFLAMLEYYYLHLIEVAEQMPQQRRALSVMETLVRAPSDTVL GFYRRFGWQADAHFCEQLQEQDRKAKQYRSGHHYSLDALGVSDDELLQRFGWVYERFGFIKPDG >Mature_384_residues MLKLLKRYSRLFLVSWAPRYQGQWHGFSLQRLLVMLVFWPSFLLVQAINGIGLGLDYLLFPGFRRVSVREPLFVIGVPRS GTTFLHRLLAMDSRFTTTALWELLFAPSITQRYFWTGMARLDKWLGRPGARLVCWLERRLLSGLDGVHKTGLLDPEEDYL GLIPVWGCFLLVLVVPVPSLWQLTFLDRDGSADEKQRLMQSYRRFVQRHLYFHGQGKTLLSKNPSFTPWMETLAEAFPDA RFIGCLRSPTAAVPSQVNSILIGARLFDGRDTTAYWREGFLAMLEYYYLHLIEVAEQMPQQRRALSVMETLVRAPSDTVL GFYRRFGWQADAHFCEQLQEQDRKAKQYRSGHHYSLDALGVSDDELLQRFGWVYERFGFIKPDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44589; Mature: 44589
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLLKRYSRLFLVSWAPRYQGQWHGFSLQRLLVMLVFWPSFLLVQAINGIGLGLDYLLF CHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC PGFRRVSVREPLFVIGVPRSGTTFLHRLLAMDSRFTTTALWELLFAPSITQRYFWTGMAR CCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LDKWLGRPGARLVCWLERRLLSGLDGVHKTGLLDPEEDYLGLIPVWGCFLLVLVVPVPSL HHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCH WQLTFLDRDGSADEKQRLMQSYRRFVQRHLYFHGQGKTLLSKNPSFTPWMETLAEAFPDA HEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHCCCH RFIGCLRSPTAAVPSQVNSILIGARLFDGRDTTAYWREGFLAMLEYYYLHLIEVAEQMPQ HHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRALSVMETLVRAPSDTVLGFYRRFGWQADAHFCEQLQEQDRKAKQYRSGHHYSLDALG HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC VSDDELLQRFGWVYERFGFIKPDG CCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKLLKRYSRLFLVSWAPRYQGQWHGFSLQRLLVMLVFWPSFLLVQAINGIGLGLDYLLF CHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC PGFRRVSVREPLFVIGVPRSGTTFLHRLLAMDSRFTTTALWELLFAPSITQRYFWTGMAR CCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LDKWLGRPGARLVCWLERRLLSGLDGVHKTGLLDPEEDYLGLIPVWGCFLLVLVVPVPSL HHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCH WQLTFLDRDGSADEKQRLMQSYRRFVQRHLYFHGQGKTLLSKNPSFTPWMETLAEAFPDA HEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHCCCH RFIGCLRSPTAAVPSQVNSILIGARLFDGRDTTAYWREGFLAMLEYYYLHLIEVAEQMPQ HHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRALSVMETLVRAPSDTVLGFYRRFGWQADAHFCEQLQEQDRKAKQYRSGHHYSLDALG HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC VSDDELLQRFGWVYERFGFIKPDG CCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA