| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833819
Identifier: 110833819
GI number: 110833819
Start: 1078563
End: 1079600
Strand: Direct
Name: 110833819
Synonym: ABO_0958
Alternate gene names: NA
Gene position: 1078563-1079600 (Clockwise)
Preceding gene: 110833818
Following gene: 110833820
Centisome position: 34.57
GC content: 55.59
Gene sequence:
>1038_bases ATGTCCCAGATAGATACACAGAAACTGGCTGAGTATTTTGAGCAGCATATCGAGGGCTTCAAGGGTCCCATTGAAGCGGA GAAATTCGAGGGGGGGCAGTCCAACCCTACCTTCAAGATTACGGCCGCCTCTGGCTCCTATGTGCTGCGCCGTCAGCCGC CGGGCAAACTGCTCAAATCCGCCCATGCGGTGGATCGCGAATTCCGTGTTATGGCCGCGTTGAAAGACACCGATGTACCG GTGCCCAATGTGCTGCACCTGTGCGAAGACCGTGATGTTATCGGCTCCATGTTCTATGTGATGGAGTTTTGCGAAGGACG CATTCTCTGGGATGCGGCGCTTCCCGAGGCGGGAGAGGGCGATGCCGCAAATGCGGCACGCCGCGAGATGTACTCGCAAA TGAACCGGGTGCTGGCGGCCATTCACAGTGTGGACCTGGAGGCCGTCGGCCTGACTGATTACGGTAAGCCGGGCAGTTAT TTTGAACGTCAACTCGACCGCTGGACCCAGCAGTACGACGCGTCCAAATTGCAGGAAATTGCGGCCATGGATTCGCTGAT CGCCTGGTTACAGACCCATCAACCAGAGGATGACGGCCAAGTGTCACTGGTGCACGGTGATTACCGCTTGGACAACTTGA TGTGGCACCCGCAAAAGCCGCAAGTCATGGCGGTGCTGGATTGGGAGTTATCCACCTTGGGCCATCCACTGGCGGATCTG GCGTATCAGTGTATGGGTATGCGAATGCCTCAACGAGGCGCCAAGATGGCCGGTCTGCAAGGCAAAGACCGTACTGCGTT GGGTATTCCTACTGAAAAAGAATACGTGGCCATGTATTGCGAGCGCCGTGGTATTGCCCATATCGACAATTGGGAATTTT ATCTGGCATTCAGTTTTTTCCGCCTTGCGGCCATTTGCCAGGGAGTCGCGAAAAGGGCTCAAGACGGTAATGCCTCCAGC AAGCAGGCCTCTCAAGTAGGTGCTCTGGTCGAGCCACTGGCCTCCATGGCCATGCAAATTATTAATGAAGGGGCATAA
Upstream 100 bases:
>100_bases TAAACAATTCGCCTGATTTCAGGTGTGGCCCGCAGCGTCAATCGCGTTCTGGGTGTTGCTTTTTGCGCAGCAGAAAAAAG AAGAACAGTAGGAGGGCTCC
Downstream 100 bases:
>100_bases AGCCACGGCAAGCTGCAAGCGAAAAGGAAAGCCGGGCGGCAATGTGGCTATTGTGCTTTCGAATAGCCGCAGGCTATGGG GCTTGCGGCTTATGGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSQIDTQKLAEYFEQHIEGFKGPIEAEKFEGGQSNPTFKITAASGSYVLRRQPPGKLLKSAHAVDREFRVMAALKDTDVP VPNVLHLCEDRDVIGSMFYVMEFCEGRILWDAALPEAGEGDAANAARREMYSQMNRVLAAIHSVDLEAVGLTDYGKPGSY FERQLDRWTQQYDASKLQEIAAMDSLIAWLQTHQPEDDGQVSLVHGDYRLDNLMWHPQKPQVMAVLDWELSTLGHPLADL AYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGIAHIDNWEFYLAFSFFRLAAICQGVAKRAQDGNASS KQASQVGALVEPLASMAMQIINEGA
Sequences:
>Translated_345_residues MSQIDTQKLAEYFEQHIEGFKGPIEAEKFEGGQSNPTFKITAASGSYVLRRQPPGKLLKSAHAVDREFRVMAALKDTDVP VPNVLHLCEDRDVIGSMFYVMEFCEGRILWDAALPEAGEGDAANAARREMYSQMNRVLAAIHSVDLEAVGLTDYGKPGSY FERQLDRWTQQYDASKLQEIAAMDSLIAWLQTHQPEDDGQVSLVHGDYRLDNLMWHPQKPQVMAVLDWELSTLGHPLADL AYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGIAHIDNWEFYLAFSFFRLAAICQGVAKRAQDGNASS KQASQVGALVEPLASMAMQIINEGA >Mature_344_residues SQIDTQKLAEYFEQHIEGFKGPIEAEKFEGGQSNPTFKITAASGSYVLRRQPPGKLLKSAHAVDREFRVMAALKDTDVPV PNVLHLCEDRDVIGSMFYVMEFCEGRILWDAALPEAGEGDAANAARREMYSQMNRVLAAIHSVDLEAVGLTDYGKPGSYF ERQLDRWTQQYDASKLQEIAAMDSLIAWLQTHQPEDDGQVSLVHGDYRLDNLMWHPQKPQVMAVLDWELSTLGHPLADLA YQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGIAHIDNWEFYLAFSFFRLAAICQGVAKRAQDGNASSK QASQVGALVEPLASMAMQIINEGA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=316, Percent_Identity=53.1645569620253, Blast_Score=347, Evalue=1e-95, Organism=Homo sapiens, GI48976061, Length=316, Percent_Identity=53.1645569620253, Blast_Score=346, Evalue=2e-95, Organism=Homo sapiens, GI38505218, Length=343, Percent_Identity=41.399416909621, Blast_Score=278, Evalue=4e-75, Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=43.4782608695652, Blast_Score=252, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38498; Mature: 38367
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIDTQKLAEYFEQHIEGFKGPIEAEKFEGGQSNPTFKITAASGSYVLRRQPPGKLLKS CCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHH AHAVDREFRVMAALKDTDVPVPNVLHLCEDRDVIGSMFYVMEFCEGRILWDAALPEAGEG HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC DAANAARREMYSQMNRVLAAIHSVDLEAVGLTDYGKPGSYFERQLDRWTQQYDASKLQEI CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAMDSLIAWLQTHQPEDDGQVSLVHGDYRLDNLMWHPQKPQVMAVLDWELSTLGHPLADL HHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCEECCCCCCEEEEECCCHHHHCCCHHHH AYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGIAHIDNWEFYLAFSFF HHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH RLAAICQGVAKRAQDGNASSKQASQVGALVEPLASMAMQIINEGA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQIDTQKLAEYFEQHIEGFKGPIEAEKFEGGQSNPTFKITAASGSYVLRRQPPGKLLKS CCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHH AHAVDREFRVMAALKDTDVPVPNVLHLCEDRDVIGSMFYVMEFCEGRILWDAALPEAGEG HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC DAANAARREMYSQMNRVLAAIHSVDLEAVGLTDYGKPGSYFERQLDRWTQQYDASKLQEI CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAMDSLIAWLQTHQPEDDGQVSLVHGDYRLDNLMWHPQKPQVMAVLDWELSTLGHPLADL HHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCEECCCCCCEEEEECCCHHHHCCCHHHH AYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGIAHIDNWEFYLAFSFF HHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH RLAAICQGVAKRAQDGNASSKQASQVGALVEPLASMAMQIINEGA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA