Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is apsK [H]

Identifier: 110833791

GI number: 110833791

Start: 1041962

End: 1042579

Strand: Direct

Name: apsK [H]

Synonym: ABO_0930

Alternate gene names: 110833791

Gene position: 1041962-1042579 (Clockwise)

Preceding gene: 110833790

Following gene: 110833792

Centisome position: 33.39

GC content: 53.72

Gene sequence:

>618_bases
ATGTCTGAGAAGTCTCCGTACCAGGAAAAAGCGAACGACTCCAAAGCCCACGTGGTTTGGCATGAATCGAATGTATCGAA
GGCCGACCGCGCCAAGGTTAAGGGGCAAAAGCCTAAGTGTATCTGGCTGACCGGGTTGTCTGGCTCTGGCAAATCCACGC
TGGCCAATGCGTTGGAAGTGGCGCTGACCGAGAAGGGTAATCACACCTACTTGTTAGACGGTGACAATGTTCGCCATGGC
TTGAACAAGAACCTGGGCATGAGCGATGAAGACCGTACCGAGAATATCCGTCGGGTGTCTGAAGTGGCTAAGTTGATGGT
AGATGCGGGCTTGATTGTGGTGACGGCGTTTATCAGCCCGTTTCGTGCAGACCGTGATGCGGCCCGTGCATTGTTTGACG
ACGGTGAGTTTGTGGAAGTGTTTGTGGATGCGCCGCTGGAAGAGTGCGAGAAGCGCGACCCCAAAGGCCTGTACCAGAAA
GCGCGCCAGGGCATCATTAAGGAATTTACCGGTATCGACAGCCCTTACGAAGCCCCGAGCAAGCCGGAGCTTGTGGTGAA
TACCGCTGAAAACGACATTGAAGCCTGTGTTAAGCAGTTGATTGCGGCCATTGTGTAA

Upstream 100 bases:

>100_bases
CTGGCGGCTATGATCGAGGGCATACAGCATGGCTGAGCCCGGAAGTTGAGGGTTGTTCTTCTCAACTTTTAACGTGAACG
TTCAATTGAAGGAATATTGC

Downstream 100 bases:

>100_bases
GGGCTAGCTGATTGCGCAGAACGGATTAAGCATAACCGTAATGCGGTATTGTGCGGTGATCGGATTTGCCCCGGGCCAAG
GAGGGCCTGCCTCGACATTG

Product: adenylylsulfate kinase

Products: NA

Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHG
LNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQK
ARQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV

Sequences:

>Translated_205_residues
MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHG
LNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQK
ARQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV
>Mature_204_residues
SEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHGL
NKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKA
RQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV

Specific function: Catalyzes the synthesis of activated sulfate [H]

COG id: COG0529

COG function: function code P; Adenylylsulfate kinase and related kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the APS kinase family [H]

Homologues:

Organism=Homo sapiens, GI46094058, Length=192, Percent_Identity=53.125, Blast_Score=202, Evalue=2e-52,
Organism=Homo sapiens, GI34447231, Length=201, Percent_Identity=51.2437810945274, Blast_Score=196, Evalue=9e-51,
Organism=Homo sapiens, GI62912492, Length=201, Percent_Identity=51.2437810945274, Blast_Score=196, Evalue=9e-51,
Organism=Escherichia coli, GI1789107, Length=184, Percent_Identity=58.695652173913, Blast_Score=215, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17542422, Length=204, Percent_Identity=46.5686274509804, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322852, Length=183, Percent_Identity=55.1912568306011, Blast_Score=211, Evalue=6e-56,
Organism=Drosophila melanogaster, GI24667040, Length=209, Percent_Identity=46.4114832535885, Blast_Score=187, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24667032, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24667028, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24667036, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48,
Organism=Drosophila melanogaster, GI116007838, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24667044, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002891 [H]

Pfam domain/function: PF01583 APS_kinase [H]

EC number: =2.7.1.25 [H]

Molecular weight: Translated: 22558; Mature: 22426

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEV
CCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
ALTEKGNHTYLLDGDNVRHGLNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISP
HEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKARQGIIKEFTGIDSPYEAPS
HHCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
KPELVVNTAENDIEACVKQLIAAIV
CCCEEEECCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEV
CCCCCCHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
ALTEKGNHTYLLDGDNVRHGLNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISP
HEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKARQGIIKEFTGIDSPYEAPS
HHCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
KPELVVNTAENDIEACVKQLIAAIV
CCCEEEECCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA