| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is cyaB [H]
Identifier: 110833746
GI number: 110833746
Start: 979919
End: 981463
Strand: Direct
Name: cyaB [H]
Synonym: ABO_0885
Alternate gene names: 110833746
Gene position: 979919-981463 (Clockwise)
Preceding gene: 110833741
Following gene: 110833748
Centisome position: 31.41
GC content: 52.56
Gene sequence:
>1545_bases ATGACCTTCATCACAAAAAAGAAATCTCGCCGTCCTCAGCTGGGGCCTATGGAGCGCGCGCGCCGCCAGGCAAATTATAT TCGCCTTTTGGCTTTTCTGGTGGCCGCCATGATCCTTATTGCGGGGCTAAACCTGAACCTGTTTCCTGCGCTATATATGC TGGGGGTGGCGGGGCTGCTGATTTACCCCATGTCCGCCCAGGGCCTACTTTTTTTGTTCGACAAGCAGGATCGACCCACC AAAATGGTTCATCAGCTGCTGATGCAAGCAGATGCTATGGTGATTGGCCTTGTGTGTGCTTTGCTACATTTCTCTCTGGT GCCCGCCATGGTGCTGTTGATCATTGTTCATGCCAACGCGGTAAGTAGCGGAGGCCTCAAACCCTGGCTGATGAATATCC TGATGACCGGCGTTGGCGCTCTGCTGATGGGCTGGGTTTTGGATTTCAAGGTGCTACCACCGCAACAGACACCGGTTTTG CTGTCGGTTATCTCCATGCTCGGTTTGGGCATTTATGTCGGGGCGTCATCTGCATTTGCTCGCCTGCAGGCTCGCTATTT GCAACAGGCACAGGAGCTGGTGCGCCATCAGCAGAAACAAGCGGTGGATATGTCTCGCAAGCTGGCCAAGTATTTACCGC CCCAGGTGTGGGGTTCCATTTTTTCCGGCAAGCGCGATGCCAAGCTGGGAACCGAGCGTAAGCGGCTCACGGTATTTTTT TCTGATATTAAAGGCTTTAGTGCCATTTCCGAAGAGCTGCCATTAGCGACTCTGACTAAGATGCTCAACACTTACCTGAG CGAAATGACCCGCATTGCACTGCGCCACGGTGGCACTATCGACAAGTTCATCGGTGATGCAGTGATGGTGTTTTTCGGTG ACCCGAAAAGCGCCGGTGCCCAGGAAGATGCCTACCGATGTGTATTAATGGCCATCGAGATGCAGGAGCAAATGAAATTA TTACGCCAGCGCTGGGCTCACGAAGGTATTGAACACAAGCTGGAAATCCGTATTGGTATTAACACCGGGTATGCGACGGT GGGCAACTTTGGCACCGATTCTCGTATGGACTACACCATTTTGGGCACTGATGTGAACCTGGCCAGTCGCCTAGAATCGG CTTGCCGTCCAGGTGGCGTGCTGATTTCAGAGGCGACCCAAGAACTGGTGAAGGACCGAATTCAGTGCCGCAACATGGGT GACATCCAAGTAAAAGGATTTAACCGGCCGATTTCGGTGTTTGAAGCTCTAGGAGCCAAAAGGGATAGCGGAGCAAAGAA CCGTTATGTGTCGGCGCAAACGGCGGGTTTTGGTATGCATATCGACCTGGAGCGCATTCGTAACTTCGACAAGAACACTA TCCTGCGCACCCTGGCCCATTGCGCCACAGATCTGAAACAGGACAAGCTAGTGGAAGTGGACTATGAGTCGGAAGGCTTC AGCTTGCATGTGGAAAGCCACACCTTGAAAAAACGGGATCGTGAGAAAGTGATCGAAATGATGGGGCGTGCCGCCAAGAA AGTGCAGACAGAAGTACGAGTGTAA
Upstream 100 bases:
>100_bases GCTTCCAGGCAGCAAGGAATCCTCGACCTTTAGTCATCCCAGTCTTTTTTCTTATACGGTAAACCGCTAAGCTCCGCAGA AATCGCGTGAAACCGATCAC
Downstream 100 bases:
>100_bases TTCGCTACCCGCTCCCTGAGACGCTGCTTTAGGTGGGCAGGCGTCCACCTAAAGCAGCTGACCGAATGTTACTGACCAAG AATGGCGTCAGCGGCTTTTT
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTFITKKKSRRPQLGPMERARRQANYIRLLAFLVAAMILIAGLNLNLFPALYMLGVAGLLIYPMSAQGLLFLFDKQDRPT KMVHQLLMQADAMVIGLVCALLHFSLVPAMVLLIIVHANAVSSGGLKPWLMNILMTGVGALLMGWVLDFKVLPPQQTPVL LSVISMLGLGIYVGASSAFARLQARYLQQAQELVRHQQKQAVDMSRKLAKYLPPQVWGSIFSGKRDAKLGTERKRLTVFF SDIKGFSAISEELPLATLTKMLNTYLSEMTRIALRHGGTIDKFIGDAVMVFFGDPKSAGAQEDAYRCVLMAIEMQEQMKL LRQRWAHEGIEHKLEIRIGINTGYATVGNFGTDSRMDYTILGTDVNLASRLESACRPGGVLISEATQELVKDRIQCRNMG DIQVKGFNRPISVFEALGAKRDSGAKNRYVSAQTAGFGMHIDLERIRNFDKNTILRTLAHCATDLKQDKLVEVDYESEGF SLHVESHTLKKRDREKVIEMMGRAAKKVQTEVRV
Sequences:
>Translated_514_residues MTFITKKKSRRPQLGPMERARRQANYIRLLAFLVAAMILIAGLNLNLFPALYMLGVAGLLIYPMSAQGLLFLFDKQDRPT KMVHQLLMQADAMVIGLVCALLHFSLVPAMVLLIIVHANAVSSGGLKPWLMNILMTGVGALLMGWVLDFKVLPPQQTPVL LSVISMLGLGIYVGASSAFARLQARYLQQAQELVRHQQKQAVDMSRKLAKYLPPQVWGSIFSGKRDAKLGTERKRLTVFF SDIKGFSAISEELPLATLTKMLNTYLSEMTRIALRHGGTIDKFIGDAVMVFFGDPKSAGAQEDAYRCVLMAIEMQEQMKL LRQRWAHEGIEHKLEIRIGINTGYATVGNFGTDSRMDYTILGTDVNLASRLESACRPGGVLISEATQELVKDRIQCRNMG DIQVKGFNRPISVFEALGAKRDSGAKNRYVSAQTAGFGMHIDLERIRNFDKNTILRTLAHCATDLKQDKLVEVDYESEGF SLHVESHTLKKRDREKVIEMMGRAAKKVQTEVRV >Mature_513_residues TFITKKKSRRPQLGPMERARRQANYIRLLAFLVAAMILIAGLNLNLFPALYMLGVAGLLIYPMSAQGLLFLFDKQDRPTK MVHQLLMQADAMVIGLVCALLHFSLVPAMVLLIIVHANAVSSGGLKPWLMNILMTGVGALLMGWVLDFKVLPPQQTPVLL SVISMLGLGIYVGASSAFARLQARYLQQAQELVRHQQKQAVDMSRKLAKYLPPQVWGSIFSGKRDAKLGTERKRLTVFFS DIKGFSAISEELPLATLTKMLNTYLSEMTRIALRHGGTIDKFIGDAVMVFFGDPKSAGAQEDAYRCVLMAIEMQEQMKLL RQRWAHEGIEHKLEIRIGINTGYATVGNFGTDSRMDYTILGTDVNLASRLESACRPGGVLISEATQELVKDRIQCRNMGD IQVKGFNRPISVFEALGAKRDSGAKNRYVSAQTAGFGMHIDLERIRNFDKNTILRTLAHCATDLKQDKLVEVDYESEGFS LHVESHTLKKRDREKVIEMMGRAAKKVQTEVRV
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI4557257, Length=172, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI148536830, Length=159, Percent_Identity=27.6729559748428, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193206632, Length=192, Percent_Identity=32.8125, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534657, Length=256, Percent_Identity=27.34375, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17557192, Length=251, Percent_Identity=27.4900398406374, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17534659, Length=214, Percent_Identity=29.4392523364486, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193207841, Length=252, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193206054, Length=259, Percent_Identity=26.6409266409266, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71989822, Length=241, Percent_Identity=26.5560165975104, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71989805, Length=241, Percent_Identity=26.5560165975104, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI221330470, Length=228, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI221330468, Length=228, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI62484477, Length=271, Percent_Identity=28.4132841328413, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI62484298, Length=271, Percent_Identity=28.4132841328413, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI116008008, Length=271, Percent_Identity=28.4132841328413, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24585694, Length=294, Percent_Identity=24.1496598639456, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24647268, Length=214, Percent_Identity=30.3738317757009, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 57376; Mature: 57245
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFITKKKSRRPQLGPMERARRQANYIRLLAFLVAAMILIAGLNLNLFPALYMLGVAGLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IYPMSAQGLLFLFDKQDRPTKMVHQLLMQADAMVIGLVCALLHFSLVPAMVLLIIVHANA HCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSSGGLKPWLMNILMTGVGALLMGWVLDFKVLPPQQTPVLLSVISMLGLGIYVGASSAFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH RLQARYLQQAQELVRHQQKQAVDMSRKLAKYLPPQVWGSIFSGKRDAKLGTERKRLTVFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHEEEEH SDIKGFSAISEELPLATLTKMLNTYLSEMTRIALRHGGTIDKFIGDAVMVFFGDPKSAGA HHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCCC QEDAYRCVLMAIEMQEQMKLLRQRWAHEGIEHKLEIRIGINTGYATVGNFGTDSRMDYTI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCEEEE LGTDVNLASRLESACRPGGVLISEATQELVKDRIQCRNMGDIQVKGFNRPISVFEALGAK EECCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCC RDSGAKNRYVSAQTAGFGMHIDLERIRNFDKNTILRTLAHCATDLKQDKLVEVDYESEGF CCCCCCCCEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC SLHVESHTLKKRDREKVIEMMGRAAKKVQTEVRV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFITKKKSRRPQLGPMERARRQANYIRLLAFLVAAMILIAGLNLNLFPALYMLGVAGLL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IYPMSAQGLLFLFDKQDRPTKMVHQLLMQADAMVIGLVCALLHFSLVPAMVLLIIVHANA HCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSSGGLKPWLMNILMTGVGALLMGWVLDFKVLPPQQTPVLLSVISMLGLGIYVGASSAFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH RLQARYLQQAQELVRHQQKQAVDMSRKLAKYLPPQVWGSIFSGKRDAKLGTERKRLTVFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHEEEEH SDIKGFSAISEELPLATLTKMLNTYLSEMTRIALRHGGTIDKFIGDAVMVFFGDPKSAGA HHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCCC QEDAYRCVLMAIEMQEQMKLLRQRWAHEGIEHKLEIRIGINTGYATVGNFGTDSRMDYTI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCEEEE LGTDVNLASRLESACRPGGVLISEATQELVKDRIQCRNMGDIQVKGFNRPISVFEALGAK EECCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCC RDSGAKNRYVSAQTAGFGMHIDLERIRNFDKNTILRTLAHCATDLKQDKLVEVDYESEGF CCCCCCCCEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC SLHVESHTLKKRDREKVIEMMGRAAKKVQTEVRV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]