| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is queF
Identifier: 110833741
GI number: 110833741
Start: 975449
End: 976273
Strand: Direct
Name: queF
Synonym: ABO_0880
Alternate gene names: 110833741
Gene position: 975449-976273 (Clockwise)
Preceding gene: 110833740
Following gene: 110833746
Centisome position: 31.26
GC content: 52.24
Gene sequence:
>825_bases ATGAGTTATCTTAAAGAAACGCCGCTGGGTCGCTCCAGTGAGTATGTTGATCAATACATGCCTTCGCTGTTGTGTCCGGT GCCGCGCTGGGACGCGCGCGAGGGCCTGGAGCTGGAAAGTGCCACACTGCCTTTTCACGGCTCGGATATTTGGAATGCCT ACGAATTGTCCTGGCTCAATGAAAAGGGCAAGCCCATTGTGGCCATGTGCGAACTGCGTGTTCCGTGCACAACCCCGAAC ATTGTTGAGTCCAAGTCCTTAAAGCTGTATCTGAATTCGTTTGCCAATACTCGCTTTCAAAGCCGCGATGCGGTGCGTGC TGCTATTGAGAAAGATGTGGCACAAACAGCAGGGGGCAACATTGAGGTATTACTGTTTTCGCTGCAGGAGTCGGCGGGTT TCCCTGTGTGGGAAGATCGCGGCGATTGCGTGGACAATATAGATCTGAATTTCGAGCATTACGAGTACCGGCCTGATTTG CTGTTATGCGATCAGGGCCCCGAACAAACTGGCCAGTTGTATTCTCATTTGTTGCGCAGCCATTGTCCGGTTACCGATCA GCCAGACTGGGCGACAGTGGTCGTTCGTTACACCGGTCGTGCTATCAGCCCGGCCAGCTTTTTGCGCTATGTGGTATCGC TGCGAAATCATCAGGGCTTTCACGAGCAGATTATTGAACAAATGTTTGTCGATCTGATGACGCAATGTTCGCCTCGCCAC CTGACCGTTTACGGTCGTTTTACCCGGCGTGGTGGAATTGATATCAATCCGTTCCGCTCAAACAGTGAGCAGCCATTACC GAACCGTCGCACTATTCGCCAGTAA
Upstream 100 bases:
>100_bases TGCATCGTGGTACCGGTATCCGGCACTAACCAATGGGCTTGAATCCGGTTATCTTTAACCATTGCCGACGACCCATGGTG GGGGCTACCAAGAGGTTATC
Downstream 100 bases:
>100_bases GGGAAAGTAGCGGCGGGTTTGTGGTTTTGCTGTTTACCTTCGTGTCATTGGCGTTATCTTGTTGCCGCCTTCTGTCTAGT ATGGCTGGAGGTACGGCTTC
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSYLKETPLGRSSEYVDQYMPSLLCPVPRWDAREGLELESATLPFHGSDIWNAYELSWLNEKGKPIVAMCELRVPCTTPN IVESKSLKLYLNSFANTRFQSRDAVRAAIEKDVAQTAGGNIEVLLFSLQESAGFPVWEDRGDCVDNIDLNFEHYEYRPDL LLCDQGPEQTGQLYSHLLRSHCPVTDQPDWATVVVRYTGRAISPASFLRYVVSLRNHQGFHEQIIEQMFVDLMTQCSPRH LTVYGRFTRRGGIDINPFRSNSEQPLPNRRTIRQ
Sequences:
>Translated_274_residues MSYLKETPLGRSSEYVDQYMPSLLCPVPRWDAREGLELESATLPFHGSDIWNAYELSWLNEKGKPIVAMCELRVPCTTPN IVESKSLKLYLNSFANTRFQSRDAVRAAIEKDVAQTAGGNIEVLLFSLQESAGFPVWEDRGDCVDNIDLNFEHYEYRPDL LLCDQGPEQTGQLYSHLLRSHCPVTDQPDWATVVVRYTGRAISPASFLRYVVSLRNHQGFHEQIIEQMFVDLMTQCSPRH LTVYGRFTRRGGIDINPFRSNSEQPLPNRRTIRQ >Mature_273_residues SYLKETPLGRSSEYVDQYMPSLLCPVPRWDAREGLELESATLPFHGSDIWNAYELSWLNEKGKPIVAMCELRVPCTTPNI VESKSLKLYLNSFANTRFQSRDAVRAAIEKDVAQTAGGNIEVLLFSLQESAGFPVWEDRGDCVDNIDLNFEHYEYRPDLL LCDQGPEQTGQLYSHLLRSHCPVTDQPDWATVVVRYTGRAISPASFLRYVVSLRNHQGFHEQIIEQMFVDLMTQCSPRHL TVYGRFTRRGGIDINPFRSNSEQPLPNRRTIRQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1789158, Length=268, Percent_Identity=47.3880597014925, Blast_Score=253, Evalue=7e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_ALCBS (Q0VR70)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692600.1 - ProteinModelPortal: Q0VR70 - SMR: Q0VR70 - STRING: Q0VR70 - GeneID: 4212696 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_0880 - NMPDR: fig|393595.12.peg.884 - eggNOG: COG0780 - HOGENOM: HBG289139 - OMA: PFRSNFE - PhylomeDB: Q0VR70 - ProtClustDB: PRK11792 - BioCyc: ABOR393595:ABO_0880-MONOMER - GO: GO:0005737 - HAMAP: MF_00817 - InterPro: IPR016428 - InterPro: IPR020602 - PIRSF: PIRSF004750 - TIGRFAMs: TIGR03138
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 31403; Mature: 31272
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLKETPLGRSSEYVDQYMPSLLCPVPRWDAREGLELESATLPFHGSDIWNAYELSWLN CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC EKGKPIVAMCELRVPCTTPNIVESKSLKLYLNSFANTRFQSRDAVRAAIEKDVAQTAGGN CCCCEEEEEEEEECCCCCCCCCCCCHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC IEVLLFSLQESAGFPVWEDRGDCVDNIDLNFEHYEYRPDLLLCDQGPEQTGQLYSHLLRS EEEEEEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHH HCPVTDQPDWATVVVRYTGRAISPASFLRYVVSLRNHQGFHEQIIEQMFVDLMTQCSPRH CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LTVYGRFTRRGGIDINPFRSNSEQPLPNRRTIRQ EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SYLKETPLGRSSEYVDQYMPSLLCPVPRWDAREGLELESATLPFHGSDIWNAYELSWLN CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC EKGKPIVAMCELRVPCTTPNIVESKSLKLYLNSFANTRFQSRDAVRAAIEKDVAQTAGGN CCCCEEEEEEEEECCCCCCCCCCCCHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC IEVLLFSLQESAGFPVWEDRGDCVDNIDLNFEHYEYRPDLLLCDQGPEQTGQLYSHLLRS EEEEEEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHH HCPVTDQPDWATVVVRYTGRAISPASFLRYVVSLRNHQGFHEQIIEQMFVDLMTQCSPRH CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LTVYGRFTRRGGIDINPFRSNSEQPLPNRRTIRQ EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA