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The map label for this gene is ccmB [H]

Identifier: 110833732

GI number: 110833732

Start: 967513

End: 968181

Strand: Direct

Name: ccmB [H]

Synonym: ABO_0871

Alternate gene names: 110833732

Gene position: 967513-968181 (Clockwise)

Preceding gene: 110833731

Following gene: 110833733

Centisome position: 31.01

GC content: 58.45

Gene sequence:

>669_bases
ATGAGCGTGTTTCGCGCGGCGCTGTCCCGTGAGTTGCTGGTGCTGTGGCGTAGCCCGGCAGAAATCATCAATCCGTTGTT
TTTCTTTGTCATGGTGATCAGCCTGTTTCCGTTGGCGATTTCCCCGAAACCGGAATTATTGGCGCTGGTGGCCCCCGGGG
TGCTTTGGGTGGCCGCGTTGTTGGCGGTGATGTTATCGCTGGATGGGTTGTTCCGCCGCGACCAGGAAAGTGGTGTGTTG
GAGTTGTTGCTCACAGCCCCGGTGATGGCCGTGGTGCCGGTGAGCGCCAAGCTGCTGGCTCATTGGTTACTCACTGGCTT
GCCGTTGGTACTGATTTCACCGGTGCTGGCGCATATGCTGCAGCTGCCCAATGGGGTGCTGGCTACGGTGGTGCTGAGTT
TATTGTTGGGCACGCCAGCACTGACCATTATTGGTGCTATTGGTGCAGCGCTTACGGTGGGGTTGAATCGGGGCGGTATT
CTGTTGGCGGTGCTGGTGCTGCCCTTGTATATCCCGGTACTGATTTTTGGCGCCGGGGCGGTGAGTGCCGCTGTGGATGG
CGGTGCAGTGAATGGCATTCTGGCTATTCTCGGGGCCTTGCTGGCGCTGACCATTAGCTTAGGCCCGTTGGCGGTGGCTG
CCGGCCTAAAAATCAGCTCAGGGAATTAA

Upstream 100 bases:

>100_bases
GCACCTTGGTGATTTATACCTCTCACCACCAGGTTGGCGATGGCGTGCGGCGATTACATCTGGCCCACGGGCAGGCAGAA
GTGACGGAAGGGGGGCGGGT

Downstream 100 bases:

>100_bases
GCGCGCCGCTATCCGACGGGAAAGCGGGCGGTATTGAAAGTAGGTGTCTGCATGGTTTGGCAAACAATAAAACGCTGGTA
TCACATGCTCGGTTCGCCGC

Product: Heme exporter protein B

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmB [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSVFRAALSRELLVLWRSPAEIINPLFFFVMVISLFPLAISPKPELLALVAPGVLWVAALLAVMLSLDGLFRRDQESGVL
ELLLTAPVMAVVPVSAKLLAHWLLTGLPLVLISPVLAHMLQLPNGVLATVVLSLLLGTPALTIIGAIGAALTVGLNRGGI
LLAVLVLPLYIPVLIFGAGAVSAAVDGGAVNGILAILGALLALTISLGPLAVAAGLKISSGN

Sequences:

>Translated_222_residues
MSVFRAALSRELLVLWRSPAEIINPLFFFVMVISLFPLAISPKPELLALVAPGVLWVAALLAVMLSLDGLFRRDQESGVL
ELLLTAPVMAVVPVSAKLLAHWLLTGLPLVLISPVLAHMLQLPNGVLATVVLSLLLGTPALTIIGAIGAALTVGLNRGGI
LLAVLVLPLYIPVLIFGAGAVSAAVDGGAVNGILAILGALLALTISLGPLAVAAGLKISSGN
>Mature_221_residues
SVFRAALSRELLVLWRSPAEIINPLFFFVMVISLFPLAISPKPELLALVAPGVLWVAALLAVMLSLDGLFRRDQESGVLE
LLLTAPVMAVVPVSAKLLAHWLLTGLPLVLISPVLAHMLQLPNGVLATVVLSLLLGTPALTIIGAIGAALTVGLNRGGIL
LAVLVLPLYIPVLIFGAGAVSAAVDGGAVNGILAILGALLALTISLGPLAVAAGLKISSGN

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

Organism=Escherichia coli, GI1788528, Length=209, Percent_Identity=54.5454545454545, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 22727; Mature: 22596

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFRAALSRELLVLWRSPAEIINPLFFFVMVISLFPLAISPKPELLALVAPGVLWVAAL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LAVMLSLDGLFRRDQESGVLELLLTAPVMAVVPVSAKLLAHWLLTGLPLVLISPVLAHML
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QLPNGVLATVVLSLLLGTPALTIIGAIGAALTVGLNRGGILLAVLVLPLYIPVLIFGAGA
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH
VSAAVDGGAVNGILAILGALLALTISLGPLAVAAGLKISSGN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC
>Mature Secondary Structure 
SVFRAALSRELLVLWRSPAEIINPLFFFVMVISLFPLAISPKPELLALVAPGVLWVAAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LAVMLSLDGLFRRDQESGVLELLLTAPVMAVVPVSAKLLAHWLLTGLPLVLISPVLAHML
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QLPNGVLATVVLSLLLGTPALTIIGAIGAALTVGLNRGGILLAVLVLPLYIPVLIFGAGA
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH
VSAAVDGGAVNGILAILGALLALTISLGPLAVAAGLKISSGN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]