| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is thrC [H]
Identifier: 110833668
GI number: 110833668
Start: 899765
End: 900847
Strand: Direct
Name: thrC [H]
Synonym: ABO_0807
Alternate gene names: 110833668
Gene position: 899765-900847 (Clockwise)
Preceding gene: 110833667
Following gene: 110833669
Centisome position: 28.84
GC content: 53.19
Gene sequence:
>1083_bases ATGCCTTTTCGTGACCGTTACACCGGCTTGATCAACCGCTACCGTGACCACCTGCCGGTGAATGATGACACGCCGATCAT CAGCTTGGGTGAGGGGAATACCCCGCTAATTCGCCTGAAGAATATTCCCAAGTTGTTGGGCAAGGACGTGGATATCTACG TCAAATACGAAGGTCTTAATCCCACGGGATCTTTTAAGGACCGTGGTATGACCATGGCGGTGACCAAGGCCGTGGAAGAG GGCAGTAATGCCATCATCTGTGCTTCCACCGGGAACACTTCTGCAGCCGCTGCAGCCTATGCAGCTCGTGCGGGCATTAC TGCTTTCGTACTGATTCCGGAAGGCAAGATTGCCATGGGCAAGCTGGCTCAGGCGATGATGTATGGTGCCGTGATCATGC AGATCCGTGGCAATTTCGATCAGGGTATGGAGTTGGTTAAACAGGTGGCTGACAAGGCGCCGGTGACCATCGTGAACTCG GTAAACCCGTATCGTCTGCAAGGCCAGAAGTCTGCTGCCTTCGAAATTGTGGAAGAACTGGGGCGCGCGCCAGACTACCA CTGCCTGCCTGTGGGCAATGCAGGTAATATTACTGCACATTGGATGGGCTACAGCGAATACCACAAATCAGGCATCGTAA ATGCGGCGCCGAAGATGGTTGGTTATCAGGCTGAAGGTTCTGCGCCCTTTATGCGTGGCGAGCGGGTTGAGGATCCGGAA ACGGTAGCAACCGCTATTCGTATCGGTAACCCGCAGTCCTGGGACAAGGCCTGGAAGCTACAGGAAGAGTCTAAAGGTTG GTTCGACGAGCTGAGTGATCACGAGATTTTGACGGCACAGAAATTGCTGGCAGAAAAAGAAGGCATTTTCTGTGAGCCTG CTTCCGCCGCGTCAATCGGTGGTGCCATGCGAGATATTCAATCTGGCAAGATTCCGGAAGGCTCTACCATCGTTTGCACG TTGACAGGCAATGGTTTGAAAGACCCTGACACGGCCATTGCTCAGTGTCAGGACAGTCGCATGGTGACCATTGATGCGGA TCTGGATGCGGTGAAAGGCGCAATTCTGTCAAACATGTCTTAA
Upstream 100 bases:
>100_bases GCCTCACGCATCTAGCGTATGTCGTGTCGCTCAATATGACCACATTCAAGAACCGTAGAGCCTAGATTAGAGGCTTTACA CTAGAAACAGAGACCTAACC
Downstream 100 bases:
>100_bases GCTTGTGGACATAAAAAGACGGAGCCATTGGCTCCGTTTTTTTATGGATACGGGCGGGCCGGACTGGCGCCACCGGATGC GGGTGCTAAAAGCGGGTGCT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MPFRDRYTGLINRYRDHLPVNDDTPIISLGEGNTPLIRLKNIPKLLGKDVDIYVKYEGLNPTGSFKDRGMTMAVTKAVEE GSNAIICASTGNTSAAAAAYAARAGITAFVLIPEGKIAMGKLAQAMMYGAVIMQIRGNFDQGMELVKQVADKAPVTIVNS VNPYRLQGQKSAAFEIVEELGRAPDYHCLPVGNAGNITAHWMGYSEYHKSGIVNAAPKMVGYQAEGSAPFMRGERVEDPE TVATAIRIGNPQSWDKAWKLQEESKGWFDELSDHEILTAQKLLAEKEGIFCEPASAASIGGAMRDIQSGKIPEGSTIVCT LTGNGLKDPDTAIAQCQDSRMVTIDADLDAVKGAILSNMS
Sequences:
>Translated_360_residues MPFRDRYTGLINRYRDHLPVNDDTPIISLGEGNTPLIRLKNIPKLLGKDVDIYVKYEGLNPTGSFKDRGMTMAVTKAVEE GSNAIICASTGNTSAAAAAYAARAGITAFVLIPEGKIAMGKLAQAMMYGAVIMQIRGNFDQGMELVKQVADKAPVTIVNS VNPYRLQGQKSAAFEIVEELGRAPDYHCLPVGNAGNITAHWMGYSEYHKSGIVNAAPKMVGYQAEGSAPFMRGERVEDPE TVATAIRIGNPQSWDKAWKLQEESKGWFDELSDHEILTAQKLLAEKEGIFCEPASAASIGGAMRDIQSGKIPEGSTIVCT LTGNGLKDPDTAIAQCQDSRMVTIDADLDAVKGAILSNMS >Mature_359_residues PFRDRYTGLINRYRDHLPVNDDTPIISLGEGNTPLIRLKNIPKLLGKDVDIYVKYEGLNPTGSFKDRGMTMAVTKAVEEG SNAIICASTGNTSAAAAAYAARAGITAFVLIPEGKIAMGKLAQAMMYGAVIMQIRGNFDQGMELVKQVADKAPVTIVNSV NPYRLQGQKSAAFEIVEELGRAPDYHCLPVGNAGNITAHWMGYSEYHKSGIVNAAPKMVGYQAEGSAPFMRGERVEDPET VATAIRIGNPQSWDKAWKLQEESKGWFDELSDHEILTAQKLLAEKEGIFCEPASAASIGGAMRDIQSGKIPEGSTIVCTL TGNGLKDPDTAIAQCQDSRMVTIDADLDAVKGAILSNMS
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367138, Length=291, Percent_Identity=27.1477663230241, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 38746; Mature: 38614
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRDRYTGLINRYRDHLPVNDDTPIISLGEGNTPLIRLKNIPKLLGKDVDIYVKYEGLN CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCHHHHCCCEEEEEEEECCC PTGSFKDRGMTMAVTKAVEEGSNAIICASTGNTSAAAAAYAARAGITAFVLIPEGKIAMG CCCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCHHH KLAQAMMYGAVIMQIRGNFDQGMELVKQVADKAPVTIVNSVNPYRLQGQKSAAFEIVEEL HHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHHH GRAPDYHCLPVGNAGNITAHWMGYSEYHKSGIVNAAPKMVGYQAEGSAPFMRGERVEDPE CCCCCCEEEECCCCCCEEEEECCHHHHHHCCCCCCCHHHEEEECCCCCCCCCCCCCCCHH TVATAIRIGNPQSWDKAWKLQEESKGWFDELSDHEILTAQKLLAEKEGIFCEPASAASIG HHHHEEECCCCCCHHHHHCCCHHCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHH GAMRDIQSGKIPEGSTIVCTLTGNGLKDPDTAIAQCQDSRMVTIDADLDAVKGAILSNMS HHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure PFRDRYTGLINRYRDHLPVNDDTPIISLGEGNTPLIRLKNIPKLLGKDVDIYVKYEGLN CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCHHHHCCCEEEEEEEECCC PTGSFKDRGMTMAVTKAVEEGSNAIICASTGNTSAAAAAYAARAGITAFVLIPEGKIAMG CCCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCHHH KLAQAMMYGAVIMQIRGNFDQGMELVKQVADKAPVTIVNSVNPYRLQGQKSAAFEIVEEL HHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHHH GRAPDYHCLPVGNAGNITAHWMGYSEYHKSGIVNAAPKMVGYQAEGSAPFMRGERVEDPE CCCCCCEEEECCCCCCEEEEECCHHHHHHCCCCCCCHHHEEEECCCCCCCCCCCCCCCHH TVATAIRIGNPQSWDKAWKLQEESKGWFDELSDHEILTAQKLLAEKEGIFCEPASAASIG HHHHEEECCCCCCHHHHHCCCHHCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHH GAMRDIQSGKIPEGSTIVCTLTGNGLKDPDTAIAQCQDSRMVTIDADLDAVKGAILSNMS HHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]