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The map label for this gene is yycJ [H]

Identifier: 110833639

GI number: 110833639

Start: 871413

End: 872186

Strand: Direct

Name: yycJ [H]

Synonym: ABO_0778

Alternate gene names: 110833639

Gene position: 871413-872186 (Clockwise)

Preceding gene: 110833638

Following gene: 110833640

Centisome position: 27.93

GC content: 56.33

Gene sequence:

>774_bases
ATGCAGCTGGCCTCATTGGGCAGTGGCAGCAAAGGCAACGCCACGCTGGTGCACGCTGACGACACTTTGGTGTTGGTTGA
TTGTGGTTTTACCATTAAGGAAACTGAGGTGCGATTGGGGCAGCTGGGGCTGGTCGCCGATCAGCTCAGTGCGATTTTGG
TCACCCATGAGCACGGAGATCATATTCGTAGCGCCGGGGCGTTGGCCCGTAAAGTGGGGTGCCCGGTATATAGCTCATTT
GGCACCGCCAGCGCTGTGCACGACAAACGCGCCAGCCTGAAAGAGGCTAACTGGCAAGAAATTCGCCCCGGTCGGACGTT
TACACTGGGAGCGATGGAAGTTCTGCCGGTGCTGGTGCCCCATGATGCTCGTGAACCTTGCCAGTATCGCTTTTCTTGGC
AGCAGCGCACGGTGGGAGTGCTTACCGACTTGGGTGCGATTACCCCCCATGTGGTTGATGCCTACAGGGACTGCGATGCC
TTAGTATTAGAATGCAATCACGACTCGCAATTACTAGCCTCAGGACCGTACCCAGCATCGTTGAAACGACGTGTGGGTGG
TATGTTAGGCCACCTGAGTAATGATCAGGCTGCGGCGCTGTTGCGTCAGGCCAATGTGGATCGCCTGCAGCATTTGGTGC
TGTCGCACCTGAGCGAACAGAACAACACGTCCCTGCATGCACTGGATGCCGTGCAACGGGTGGTAACCCGCGGGCGTGAA
CGAATTAGCGTTGCTAGTCAGACGGAAGGGTTTGACTGGCTACAAGTACATTAA

Upstream 100 bases:

>100_bases
ACGGTATTCAGGTGGCTGTGTTGAATGAGAAGGGCTCCGCACTGGTGGATAAAATCCCGGGGCAGGCCATTCTTGAGCGA
ATCTACGACGAGCTCGATTA

Downstream 100 bases:

>100_bases
TGCTGACCTGAGTAATAGGCCTTTCCATGGAAAAACGCGACGAGTTGTATGCCGGCAAAGCCAAGTCCGTGTACACCACC
GATGACGAAGACATGCTGAT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQLASLGSGSKGNATLVHADDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGDHIRSAGALARKVGCPVYSSF
GTASAVHDKRASLKEANWQEIRPGRTFTLGAMEVLPVLVPHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDA
LVLECNHDSQLLASGPYPASLKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLSEQNNTSLHALDAVQRVVTRGRE
RISVASQTEGFDWLQVH

Sequences:

>Translated_257_residues
MQLASLGSGSKGNATLVHADDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGDHIRSAGALARKVGCPVYSSF
GTASAVHDKRASLKEANWQEIRPGRTFTLGAMEVLPVLVPHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDA
LVLECNHDSQLLASGPYPASLKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLSEQNNTSLHALDAVQRVVTRGRE
RISVASQTEGFDWLQVH
>Mature_257_residues
MQLASLGSGSKGNATLVHADDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGDHIRSAGALARKVGCPVYSSF
GTASAVHDKRASLKEANWQEIRPGRTFTLGAMEVLPVLVPHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDA
LVLECNHDSQLLASGPYPASLKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLSEQNNTSLHALDAVQRVVTRGRE
RISVASQTEGFDWLQVH

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27948; Mature: 27948

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASLGSGSKGNATLVHADDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGD
CCCCCCCCCCCCCEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCC
HIRSAGALARKVGCPVYSSFGTASAVHDKRASLKEANWQEIRPGRTFTLGAMEVLPVLVP
HHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHCC
HDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDALVLECNHDSQLLASGPYPAS
CCCCCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEEECCCCCHH
LKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLSEQNNTSLHALDAVQRVVTRGRE
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
RISVASQTEGFDWLQVH
HEEECCCCCCCCEEEEC
>Mature Secondary Structure
MQLASLGSGSKGNATLVHADDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGD
CCCCCCCCCCCCCEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCC
HIRSAGALARKVGCPVYSSFGTASAVHDKRASLKEANWQEIRPGRTFTLGAMEVLPVLVP
HHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHCC
HDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDALVLECNHDSQLLASGPYPAS
CCCCCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEEECCCCCHH
LKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLSEQNNTSLHALDAVQRVVTRGRE
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
RISVASQTEGFDWLQVH
HEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]