| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is nadA [H]
Identifier: 110833631
GI number: 110833631
Start: 864441
End: 865490
Strand: Direct
Name: nadA [H]
Synonym: ABO_0770
Alternate gene names: 110833631
Gene position: 864441-865490 (Clockwise)
Preceding gene: 110833630
Following gene: 110833633
Centisome position: 27.71
GC content: 55.81
Gene sequence:
>1050_bases ATGACGGCAGAGGCACAAGCACGGGTCCAGGCGCATTTAGCTGAGGTGGAGCCCGAGGACACGCTCAGCGAAGAGCAACG CGCATCCTATCGTGATCGGATCAAGGCGTTGTTGCGTCAACGCGATGCGGTGTTGGTAGCGCATTACTACACAGACCCGG AAATTCAGTCGTTGGCGGAAGAAACCGGTGGCTGTGTGTCTGATTCTTTGGAAATGGCCCGCTTTGGCAAAGACCATCCT GCGTCCACGTTGATTGTGGCCGGGGTGAAGTTTATGGGTGAGACCGCCAAAATTCTTAGCCCGGAAAAACGCGTCTTCAT GCCGACACTCGAAGCGACCTGTTCATTGGATATCGGTTGTCCGGAAGAAGAGTTTTCCGCATTTTGCGACCAGCACCCGG ACCGCACTGTGGTGGTTTATGCCAATACTTCCGCTGCGGTGAAAGCCCGTGCCGATTGGGTGGTCACCTCGTCCATCGCC GTGGAGTTGATTGAGCATCTAGATAGCAACGGTGAAAAAATTCTGTGGGCGCCGGACAAGCACCTTGGCGGCTATGTTCG TGATAAAGCTGGCGCCGATGTATTGTGTTGGGACGGTGCCTGCATTGTTCACGAAGAGTTTAAAGCTAAAGGGTTGCATG ATTTGCAAGCCGCCTACCCGGATGCCGCTATTCTGGTGCACCCGGAATCCCCGGCCTCGGTGGTGGAAATGGCGGATGTG GTCGGCTCAACCTCACAGCTGATCAAGGCCGCTTGCGAGATGGACAATGAGGTGTTCATCGTTGCCACCGACAAGGGCAT TTTCTACAAGATGCAGCAGTTAGCGCCGGGCAAAACCTTCTTGGAAGCGCCGACGGCGGGCTCCGGTGCGACCTGTCGCA GTTGTGCTCACTGTCCGTGGATGGCAATGAATGGCCTGCAGAACATGCTCGCGGTGCTGGAAGATGCCAACGGCATGGGG CAGGAAATTTTCGTGGACTCGTCGCTGGCAGAAAAAGCCATGGTGCCGTTGAACCGCATGTTGGATTTCGGCCGCAAGTT GAAAGCGTGA
Upstream 100 bases:
>100_bases TATTCAGCGGTTTTTGGCTGTTGTGGTATTATGCCCGCCTTATTCTTTTATCAATTTTCCAAGTTGTTGATTTCAGGGGG AAACCCCGGGCGGTAAGGCA
Downstream 100 bases:
>100_bases CCGGCCGCTATTATTTTGTGTGACGCCTGATACAACCTGTGCAAACAACGCAGGTTGTATTCTTGCGATTTAGACAGTAC CCCGCCACCGCGCTCAGAAC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTAEAQARVQAHLAEVEPEDTLSEEQRASYRDRIKALLRQRDAVLVAHYYTDPEIQSLAEETGGCVSDSLEMARFGKDHP ASTLIVAGVKFMGETAKILSPEKRVFMPTLEATCSLDIGCPEEEFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSIA VELIEHLDSNGEKILWAPDKHLGGYVRDKAGADVLCWDGACIVHEEFKAKGLHDLQAAYPDAAILVHPESPASVVEMADV VGSTSQLIKAACEMDNEVFIVATDKGIFYKMQQLAPGKTFLEAPTAGSGATCRSCAHCPWMAMNGLQNMLAVLEDANGMG QEIFVDSSLAEKAMVPLNRMLDFGRKLKA
Sequences:
>Translated_349_residues MTAEAQARVQAHLAEVEPEDTLSEEQRASYRDRIKALLRQRDAVLVAHYYTDPEIQSLAEETGGCVSDSLEMARFGKDHP ASTLIVAGVKFMGETAKILSPEKRVFMPTLEATCSLDIGCPEEEFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSIA VELIEHLDSNGEKILWAPDKHLGGYVRDKAGADVLCWDGACIVHEEFKAKGLHDLQAAYPDAAILVHPESPASVVEMADV VGSTSQLIKAACEMDNEVFIVATDKGIFYKMQQLAPGKTFLEAPTAGSGATCRSCAHCPWMAMNGLQNMLAVLEDANGMG QEIFVDSSLAEKAMVPLNRMLDFGRKLKA >Mature_348_residues TAEAQARVQAHLAEVEPEDTLSEEQRASYRDRIKALLRQRDAVLVAHYYTDPEIQSLAEETGGCVSDSLEMARFGKDHPA STLIVAGVKFMGETAKILSPEKRVFMPTLEATCSLDIGCPEEEFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSIAV ELIEHLDSNGEKILWAPDKHLGGYVRDKAGADVLCWDGACIVHEEFKAKGLHDLQAAYPDAAILVHPESPASVVEMADVV GSTSQLIKAACEMDNEVFIVATDKGIFYKMQQLAPGKTFLEAPTAGSGATCRSCAHCPWMAMNGLQNMLAVLEDANGMGQ EIFVDSSLAEKAMVPLNRMLDFGRKLKA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=327, Percent_Identity=72.782874617737, Blast_Score=505, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 37938; Mature: 37806
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEAQARVQAHLAEVEPEDTLSEEQRASYRDRIKALLRQRDAVLVAHYYTDPEIQSLAE CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH ETGGCVSDSLEMARFGKDHPASTLIVAGVKFMGETAKILSPEKRVFMPTLEATCSLDIGC HHCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHCCHHHHCCCCCCEEEEECCCEEEECCCC PEEEFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSNGEKILWAPDK CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHCCCCCEEEECCCH HLGGYVRDKAGADVLCWDGACIVHEEFKAKGLHDLQAAYPDAAILVHPESPASVVEMADV HCCCCHHHCCCCEEEEECCEEEEEHHHHHCCCHHHHHCCCCCEEEEECCCCHHHHHHHHH VGSTSQLIKAACEMDNEVFIVATDKGIFYKMQQLAPGKTFLEAPTAGSGATCRSCAHCPW HCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCH MAMNGLQNMLAVLEDANGMGQEIFVDSSLAEKAMVPLNRMLDFGRKLKA HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAEAQARVQAHLAEVEPEDTLSEEQRASYRDRIKALLRQRDAVLVAHYYTDPEIQSLAE CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH ETGGCVSDSLEMARFGKDHPASTLIVAGVKFMGETAKILSPEKRVFMPTLEATCSLDIGC HHCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHCCHHHHCCCCCCEEEEECCCEEEECCCC PEEEFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSNGEKILWAPDK CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHCCCCCEEEECCCH HLGGYVRDKAGADVLCWDGACIVHEEFKAKGLHDLQAAYPDAAILVHPESPASVVEMADV HCCCCHHHCCCCEEEEECCEEEEEHHHHHCCCHHHHHCCCCCEEEEECCCCHHHHHHHHH VGSTSQLIKAACEMDNEVFIVATDKGIFYKMQQLAPGKTFLEAPTAGSGATCRSCAHCPW HCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCH MAMNGLQNMLAVLEDANGMGQEIFVDSSLAEKAMVPLNRMLDFGRKLKA HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA