| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833628
Identifier: 110833628
GI number: 110833628
Start: 860892
End: 862184
Strand: Direct
Name: 110833628
Synonym: ABO_0767
Alternate gene names: NA
Gene position: 860892-862184 (Clockwise)
Preceding gene: 110833627
Following gene: 110833629
Centisome position: 27.59
GC content: 53.21
Gene sequence:
>1293_bases ATGAGTCAGCGTATTGCTATTGTTGGAGCCGGTATTAGTGGGCTTAGCACCGCTTGGTATCTGTCAAAAGCGGGTCATCA GGTCGATGTATTTGAAGCCAATGATTATCTGGGTGGGCATACCTGTACGATTCCGGTATCTCGACCCCATGGTGATTACG CTATTGATGTAGGGTTTATTGTATTCAACGATCGAACCTACCCGAATTACCTTCGTTTGTTGGAGGAGCTTGGCTTGCAG GGCCAACCCACTCCTATGGGGTTTGCGGTCAGTGATGAGAAGAACGGGCTGGAATACTGCGGCGATGGGCTGGGGGGCAT GTTTGCCCAGAAACGCAATTTGCTGAACTTTTCACACTGGCGTTTCATTCGCGACATCTTGCGCTTCAATAAGCAGGCAC CGGCTTTGCTTAATAGCGCCAAGGGAGATCTTCCTTTGGGGCAGTATCTGCGTGAGCAGGGTTACGGTGAACGCTTTGCC CGGGATTATATTCTCGCCATGGGTGGGGCTATCTGGTCTTGTTCGCTGGAGCAGATGGAAGTTTTTCCTGCTCGGTTTTT TATCCGGTTTTTCCAGAATCATGGTTTATTGTCGTTGAATGATCGGCCTCAGTGGTTCGTGGTGCCTGGTGGTTCCAATC AATACGTGAAACCTCTGGTGGACGGTTGCAACGCTACCTTTCATACCCGCACCCCGGTGCAGTCGATACGACGGGGCTCA GCGGGAGTGGGCGTAGAGGCTGGTGTCGGTGTCACCGTCACCGTAGGCGGGACAGAGCGGCATTACGATCAGGTTGTGCT GGCGTGCCACAGCGACCAGGCGCTGGCATTACTCAGTGACCCAGACGAACGGGAAGAAGCGAACCTGTCGCAATTGGGTT ACCAGGACAATGAAGTGGTCCTGCATACGGATACAGCATTGCTACCGCGTCGGGAACGGGTATGGTCAAGCTGGAATGCC ATGTTGTATGCGCAGGATCAGGAACGGGTTCAAGTGACCTATAACATGAATATTCTGCAGGGTATTGCTGCCCCGGAAAC CTTCTGTGTCACGCTGAACGCCAGTGACCGAATTGATACTAAAAAGGTACTCGCCCGTTACCATTTTGCGCATCCGTTAT TCACACCGCAGACGGTGGCGGCCCGGGAACAATTACTGAAAGACAACGGCAAAAATGCCACCTGGTTTGCCGGTGCCTGG TGTCGCAATGGTTTCCATGAAGATGGTGTGGTGTCTGCGTTGAACGTGGTGGCAGGGATCACTGGCAAGGCGCAGGAAGG GGGCGTTGCGTGA
Upstream 100 bases:
>100_bases TAGCGTTCAAGGCGGCTAAAAGCCGGTTTGATAAAACCTCTTAGGATCAGCAACACCCCGTGTCGCCGCCGGCCATGGGC AATAGTAGGAAGGGAAAGAC
Downstream 100 bases:
>100_bases TGGAGGCTTCGGTCAATGACCCGTTGACGCCCTATGCTATTGCGCGCGGGCGCGTCTGGCATCAACGGTTGCAACCGTTT ACCTACAGCTTTGATTACCC
Product: amine-oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQ GQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFA RDYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNA MLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAW CRNGFHEDGVVSALNVVAGITGKAQEGGVA
Sequences:
>Translated_430_residues MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQ GQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFA RDYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNA MLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAW CRNGFHEDGVVSALNVVAGITGKAQEGGVA >Mature_429_residues SQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQG QPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFAR DYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGSA GVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNAM LYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWC RNGFHEDGVVSALNVVAGITGKAQEGGVA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47552; Mature: 47421
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFI CCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEE VFNDRTYPNYLRLLEELGLQGQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHW EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCHHHH RFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFARDYILAMGGAIWSCSLEQME HHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHEECCHHHHH VFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS HHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCHHHHHCCC AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVV CCCCEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCHHHCCHHHCCCCCCEEE LHTDTALLPRRERVWSSWNAMLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDT EEECCCCCCCHHHHHHCCCEEEEEECCCEEEEEEECHHHHHCCCCCEEEEEECCCCCCCH KKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWCRNGFHEDGVVSALNVVAGI HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCC TGKAQEGGVA CCCCCCCCCC >Mature Secondary Structure SQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFI CCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEE VFNDRTYPNYLRLLEELGLQGQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHW EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCHHHH RFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFARDYILAMGGAIWSCSLEQME HHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHEECCHHHHH VFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS HHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCHHHHHCCC AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVV CCCCEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCHHHCCHHHCCCCCCEEE LHTDTALLPRRERVWSSWNAMLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDT EEECCCCCCCHHHHHHCCCEEEEEECCCEEEEEEECHHHHHCCCCCEEEEEECCCCCCCH KKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWCRNGFHEDGVVSALNVVAGI HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCC TGKAQEGGVA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA