| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ppc
Identifier: 110833541
GI number: 110833541
Start: 756253
End: 758919
Strand: Direct
Name: ppc
Synonym: ABO_0680
Alternate gene names: 110833541
Gene position: 756253-758919 (Clockwise)
Preceding gene: 110833537
Following gene: 110833543
Centisome position: 24.24
GC content: 59.88
Gene sequence:
>2667_bases GTGGATCACAATGTAAATGCACCATTGCGTGATGATGTCCGGTTATTGGGTGATTTGTTGGGCGAGTGCCTGCGCCAGCA GGCGGGCGATTCCATTTACGAGACGGTGGAAAAAATCCGCCAAGCCTCGGTGGCGACCCGCACCGAAGGGGGGGCGTCAC TGGCCTCGTTGCGCGATTTATTATCGCCGCTGGATGACGCGACTCTGCTGGAGGTCGCGCGTGCGTTCAGTCAGTTTCTT AACTTGAGCAATATTGCCGAGCAACATCACCGGGAGCGGTTGCATCGTCAACACCAGCGCTATCCGGGGGATGCGGGTAC TGATCAGGGGTTGCAGGAGGTGCTGCAGCGCCTGGCCGATAATGACATTGCCAAAGAGCAAATTTCGGGAACGCTTGAGC AGCTTTCTGTCGAGCTGGTGCTGACGGCCCACCCCACCGAGGTGACCCGCCGTACGTTGATTCGCAAGTATGACCAAATG GCCGATCTGCTCAGTGAGCTGGATCGCCCAGACTTCAATGAAGACGAGCGTGAGTTGCGCCGCGAACGTCTGCGCCGGGT GATTCTGGCGGCCTGGTGCACCGATGAAATTCGTCGTGAAAAGCCGACCCCGGTGGACGAAGCCAAATGGGGCTTTGCCA CCATTGAACAATCCCTGTGGCAGGCGGTGCCCGATGTTCTGCGCCAACTGGAAGCACAGCTGGCCGACCGGGGGCTGCCT GCGCCCCCCTCCGACTGGGCGCCGGTGAAGTTGGCGTCGTGGATGGGCGGTGACCGGGATGGTAACCCCAATGTGACCGC CCCGGTGACTCGGGAAGTGTTGCTGCTGGCCCGCTGGATGGCGGCAGACCTGTATCTTCGCGATGTGGAGAACTTGCTGG CGGACCTGTCGATGAAGTCGGCCAGTGAGGAATTACTGGCGGCCACTGGCCCAACCCATGAACCTTACCGTGTGCTGCTG CGCGAAGTGCGTAGCCGCTTACGCCTGACTCGTCGCCAGATGGAAGCACAAGTAGAAGGCTTACCGGTGCCGGAGGGCCA AGCCTATTTACGCCGTGAAGAGTTGATGGCGCCGTTACAGTTGCTCGACCGTTCATTGCGTGCCGTGGGCCTAAGTGACA TTGCCGATGGCGATTTAAAAAATACTCTTCGCCGCCTGAACTGTTTCGGTATCACCCTGCTACGGCTGGATATTCGTCAG GAATCGACCCGTCACAGTGATGTGTTGGATGCCATCACCCGTTATCTGCAGTTGGGTCGTTACAGCGATTGGGATGAGGC GGCGCGCCAAGCGTTTCTGGTTGATGAGCTGCAGGCACGTCGACCGCTGATTGATGCCGCTTTCCGCGACAGCGAACACT GCACTGCCGAAGTCGCAGAGGTATTGGCAACGTGTGAGGTGATTGCCGAGCAAGGCAGCGAAGGGCTAGGTGCCTATGTG ATTTCCATGGCCACTACCCCGTCTGATGTGATGGCGGTGATGTTGTTGCAGAAGATAGCCGGGGTTCGTGAACCCATGCG CGTGGTGCCGCTGTTCGAGACCTTGGACGATTTGGATGGTGCCGAGCAAACCATGTCAGCGTTGTTAGCGCTGCCGTTCT ATCGAGAGCGAGTGGCTGCCGGGCAGGAAATCATGATTGGCTATTCAGATTCCGCCAAGGACGCGGGCTTTCTCGGCGCG GCCTGGGCCCAATATCGGGCACAGGAAAAGCTCACGGCCCTGTTTGCCGATAACGGCATTCCGCTCACACTGTTTCATGG CCGAGGTGGCTCCATTTCCCGAGGCGGATCGCCCACCCGCATGGCGCTGTTATCACAGCCGCCGGGCTCGGTGGCCGGGC GTATACGGGTGACGGAGCAGGGGGAGGTGATTCGGTTTAAATACGGTCGCCCGTCGGTGGCGGTGTTTAACCTGGAGCAG TATGTGGCGGCCACTTTAGAAGCAACCTTGTTGCCACCCCAGGCGGCACGGCCGGAGTGGCGCCAACAGATGCAGGCCCT GACGGATACCTCCGTGGCGGGCTATCGCGGGGTGGTGCGCGATGAGCCTGAGCTGGTGCGCTACCTGCGTACCGTTACGC CAGAAACGGAGTTGTCGCGGCTAGCGCTGGGCAGCCGCCCTGCGCGGCGCAAGTCGGATCAAGGTATCAGCTCTCTGCGG GCGATCCCTTGGGTGTTTGCTTGGACCCAGATTCGGTTAATGCTGCCTGCCTGGTTAGGCACCGGCGCCGCTCTGGAAGA TGCTCAGAACGATGCCGCGCAGCATGCTATGGTGCGGGAAATGGCTAGCGAGTGGCCTTTTTTCCAGGGCGTGGTGGATA TGCTGGAGATGGTACTGGCGAAATCGGATTTGCGTGTGGCCGCTTGGTATGAAGAGCGTTTGGCGGGGGACGATCCCGGG TTAATGCGTCTTGGTGAAGTGCTGCGCGAGCGGCTCACCGCCACGGTGAGCGCCTTGTCTGCCCTCACTGGTCGAGAAGA CTTGCTGGATAACAATCCGGTGATGCGCTGGTCGATTCGGGTGCGTGACCCTTACACCGACCCCCTGCACCTGTTGCAGG CGGAGCTGATGGCAAGGCTGCGCCAACAGGATGGCGATGAGACCTTGGAGAGTGCACTGATGGTAACCATTGCGGGTATT GCAGCGGGCTTACGCAATACAGGATAG
Upstream 100 bases:
>100_bases TTAAAACTGCAATTTGAACAGCATTTGTTGGTTATGGCACCGACTTGAAGAGCGAGTATGGTAGGCGCCGGCAACGATTC CTGAACGGTAAGGAGGCACA
Downstream 100 bases:
>100_bases GTTGTCAGCAAGGGTTCTCATCGGTGGCCGGTGCTTTTTCCTTTGAGCGCCACATGGCTGCCATCGCAGATCATCCCTGT GTTGCTGTGTTTACAGCCAC
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 888; Mature: 888
Protein sequence:
>888_residues MDHNVNAPLRDDVRLLGDLLGECLRQQAGDSIYETVEKIRQASVATRTEGGASLASLRDLLSPLDDATLLEVARAFSQFL NLSNIAEQHHRERLHRQHQRYPGDAGTDQGLQEVLQRLADNDIAKEQISGTLEQLSVELVLTAHPTEVTRRTLIRKYDQM ADLLSELDRPDFNEDERELRRERLRRVILAAWCTDEIRREKPTPVDEAKWGFATIEQSLWQAVPDVLRQLEAQLADRGLP APPSDWAPVKLASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDVENLLADLSMKSASEELLAATGPTHEPYRVLL REVRSRLRLTRRQMEAQVEGLPVPEGQAYLRREELMAPLQLLDRSLRAVGLSDIADGDLKNTLRRLNCFGITLLRLDIRQ ESTRHSDVLDAITRYLQLGRYSDWDEAARQAFLVDELQARRPLIDAAFRDSEHCTAEVAEVLATCEVIAEQGSEGLGAYV ISMATTPSDVMAVMLLQKIAGVREPMRVVPLFETLDDLDGAEQTMSALLALPFYRERVAAGQEIMIGYSDSAKDAGFLGA AWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTRMALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQ YVAATLEATLLPPQAARPEWRQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRKSDQGISSLR AIPWVFAWTQIRLMLPAWLGTGAALEDAQNDAAQHAMVREMASEWPFFQGVVDMLEMVLAKSDLRVAAWYEERLAGDDPG LMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIRVRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGI AAGLRNTG
Sequences:
>Translated_888_residues MDHNVNAPLRDDVRLLGDLLGECLRQQAGDSIYETVEKIRQASVATRTEGGASLASLRDLLSPLDDATLLEVARAFSQFL NLSNIAEQHHRERLHRQHQRYPGDAGTDQGLQEVLQRLADNDIAKEQISGTLEQLSVELVLTAHPTEVTRRTLIRKYDQM ADLLSELDRPDFNEDERELRRERLRRVILAAWCTDEIRREKPTPVDEAKWGFATIEQSLWQAVPDVLRQLEAQLADRGLP APPSDWAPVKLASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDVENLLADLSMKSASEELLAATGPTHEPYRVLL REVRSRLRLTRRQMEAQVEGLPVPEGQAYLRREELMAPLQLLDRSLRAVGLSDIADGDLKNTLRRLNCFGITLLRLDIRQ ESTRHSDVLDAITRYLQLGRYSDWDEAARQAFLVDELQARRPLIDAAFRDSEHCTAEVAEVLATCEVIAEQGSEGLGAYV ISMATTPSDVMAVMLLQKIAGVREPMRVVPLFETLDDLDGAEQTMSALLALPFYRERVAAGQEIMIGYSDSAKDAGFLGA AWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTRMALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQ YVAATLEATLLPPQAARPEWRQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRKSDQGISSLR AIPWVFAWTQIRLMLPAWLGTGAALEDAQNDAAQHAMVREMASEWPFFQGVVDMLEMVLAKSDLRVAAWYEERLAGDDPG LMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIRVRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGI AAGLRNTG >Mature_888_residues MDHNVNAPLRDDVRLLGDLLGECLRQQAGDSIYETVEKIRQASVATRTEGGASLASLRDLLSPLDDATLLEVARAFSQFL NLSNIAEQHHRERLHRQHQRYPGDAGTDQGLQEVLQRLADNDIAKEQISGTLEQLSVELVLTAHPTEVTRRTLIRKYDQM ADLLSELDRPDFNEDERELRRERLRRVILAAWCTDEIRREKPTPVDEAKWGFATIEQSLWQAVPDVLRQLEAQLADRGLP APPSDWAPVKLASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDVENLLADLSMKSASEELLAATGPTHEPYRVLL REVRSRLRLTRRQMEAQVEGLPVPEGQAYLRREELMAPLQLLDRSLRAVGLSDIADGDLKNTLRRLNCFGITLLRLDIRQ ESTRHSDVLDAITRYLQLGRYSDWDEAARQAFLVDELQARRPLIDAAFRDSEHCTAEVAEVLATCEVIAEQGSEGLGAYV ISMATTPSDVMAVMLLQKIAGVREPMRVVPLFETLDDLDGAEQTMSALLALPFYRERVAAGQEIMIGYSDSAKDAGFLGA AWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTRMALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQ YVAATLEATLLPPQAARPEWRQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRKSDQGISSLR AIPWVFAWTQIRLMLPAWLGTGAALEDAQNDAAQHAMVREMASEWPFFQGVVDMLEMVLAKSDLRVAAWYEERLAGDDPG LMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIRVRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGI AAGLRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=891, Percent_Identity=50.280583613917, Blast_Score=803, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_ALCBS (Q0VRS0)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692400.1 - ProteinModelPortal: Q0VRS0 - SMR: Q0VRS0 - STRING: Q0VRS0 - GeneID: 4212270 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_0680 - NMPDR: fig|393595.12.peg.680 - eggNOG: COG2352 - HOGENOM: HBG351035 - PhylomeDB: Q0VRS0 - ProtClustDB: PRK00009 - BioCyc: ABOR393595:ABO_0680-MONOMER - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 99099; Mature: 99099
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 144-144 ACT_SITE 553-553
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHNVNAPLRDDVRLLGDLLGECLRQQAGDSIYETVEKIRQASVATRTEGGASLASLRDL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LSPLDDATLLEVARAFSQFLNLSNIAEQHHRERLHRQHQRYPGDAGTDQGLQEVLQRLAD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC NDIAKEQISGTLEQLSVELVLTAHPTEVTRRTLIRKYDQMADLLSELDRPDFNEDERELR CHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RERLRRVILAAWCTDEIRREKPTPVDEAKWGFATIEQSLWQAVPDVLRQLEAQLADRGLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APPSDWAPVKLASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDVENLLADLSMKS CCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASEELLAATGPTHEPYRVLLREVRSRLRLTRRQMEAQVEGLPVPEGQAYLRREELMAPLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LLDRSLRAVGLSDIADGDLKNTLRRLNCFGITLLRLDIRQESTRHSDVLDAITRYLQLGR HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCC YSDWDEAARQAFLVDELQARRPLIDAAFRDSEHCTAEVAEVLATCEVIAEQGSEGLGAYV CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE ISMATTPSDVMAVMLLQKIAGVREPMRVVPLFETLDDLDGAEQTMSALLALPFYRERVAA EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GQEIMIGYSDSAKDAGFLGAAWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTR CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE MALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQYVAATLEATLLPPQAARPEW EEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCHHH RQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRKSDQGISSLR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH AIPWVFAWTQIRLMLPAWLGTGAALEDAQNDAAQHAMVREMASEWPFFQGVVDMLEMVLA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KSDLRVAAWYEERLAGDDPGLMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIR HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEEE VRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGIAAGLRNTG ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDHNVNAPLRDDVRLLGDLLGECLRQQAGDSIYETVEKIRQASVATRTEGGASLASLRDL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LSPLDDATLLEVARAFSQFLNLSNIAEQHHRERLHRQHQRYPGDAGTDQGLQEVLQRLAD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC NDIAKEQISGTLEQLSVELVLTAHPTEVTRRTLIRKYDQMADLLSELDRPDFNEDERELR CHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RERLRRVILAAWCTDEIRREKPTPVDEAKWGFATIEQSLWQAVPDVLRQLEAQLADRGLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APPSDWAPVKLASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDVENLLADLSMKS CCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASEELLAATGPTHEPYRVLLREVRSRLRLTRRQMEAQVEGLPVPEGQAYLRREELMAPLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LLDRSLRAVGLSDIADGDLKNTLRRLNCFGITLLRLDIRQESTRHSDVLDAITRYLQLGR HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCC YSDWDEAARQAFLVDELQARRPLIDAAFRDSEHCTAEVAEVLATCEVIAEQGSEGLGAYV CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE ISMATTPSDVMAVMLLQKIAGVREPMRVVPLFETLDDLDGAEQTMSALLALPFYRERVAA EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GQEIMIGYSDSAKDAGFLGAAWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTR CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE MALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQYVAATLEATLLPPQAARPEW EEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCHHH RQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRKSDQGISSLR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH AIPWVFAWTQIRLMLPAWLGTGAALEDAQNDAAQHAMVREMASEWPFFQGVVDMLEMVLA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KSDLRVAAWYEERLAGDDPGLMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIR HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEEE VRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGIAAGLRNTG ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA