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The map label for this gene is yebA [H]

Identifier: 110833467

GI number: 110833467

Start: 664424

End: 665356

Strand: Direct

Name: yebA [H]

Synonym: ABO_0606

Alternate gene names: 110833467

Gene position: 664424-665356 (Clockwise)

Preceding gene: 110833465

Following gene: 110833468

Centisome position: 21.29

GC content: 54.56

Gene sequence:

>933_bases
ATGAACATCATAGTCCTTAATAGCAAGCGCGGCCATTCGCGCACACTGCCCGTTCCCCGTCATTGGCCTTGGCTATTGGC
TGTGGTGCTGGTGGCGTTTCCTGTCCTTATTGGTGTTAGTGCTTACCTATTGGCTTATAGGGTCGGTGGTCAGCCTGAAT
TCGCCTCAATGATGACGAAGCGCTTTGCCAGCCAGCTGGAGCAGCAACAGCTGGCGCTCTCTGAACTGGATCAACAAAGC
CAGGAACAATTCCGAGCGTTGACCCTTAAGTTGGCTCAGGCTCAAGCGCGTCTGGTTCGCCTGGATGCATTGGGCGAGCG
CTTGGTTGAAGTGGCCGACATTGGTGGTGACGAATTCGATTTTAGCAGTGTCCCCGGTGTAGGCGGCCCAGAAGCTTCAG
AAGAGGGGGCCAGCTACGAGTTGCCATCGTTTATGGTAGCGCTAGATCAGATGACTACTACGCTGGAGCGTCGCGAACGT
CAGTTGGATATTCTGGAGGATCTGTTGGCGGATAAGCAACTGGAAGATCAGACCTACCTGTCTGGCCGTCCGCTGACCAA
GGGCTGGATGTCCAGCCGTTTTGGGCGACGTTCCGATCCATTCTCCGGCCGCGTAGCTTGGCATAAAGGGGTCGATTTCG
CAGGCAAGGAAGGAACGCCGATTGTGGCCACCGGTGCTGGCGTTGTGACTTATTCCGGTGAGCGCTCTGGTTATGGAAAA
ATGGTTGAGATTAATCACGGTAATGGTTTGTCCACTCGCTACGGGCACGCTATGGAGCTGCTGGTTGAACCAGGAGAAAT
TGTTCGAACCGGTGATGTGGTGGGCAAAGTGGGCAGTTCTGGTCGTTCGACAGGTCCACACGTGCATTATGAAGTGCTCA
AGAACGGTGCTCAGGTGAACCCTCAACCTTATATTTATCGCGCACGGCGGTAG

Upstream 100 bases:

>100_bases
TGGTTTTTACTTAGACTAGCCTGCAGATTGTAAAAAAAATTATAAGCGTAGTATAACTTGTTGAATTGAATGACTTTTAG
ATGGTGCGTTACGAAACGTT

Downstream 100 bases:

>100_bases
CAAAATTGTGAAAAATGGCCCCGTAAGGGGCCGTTTTCGTTAAGCGCCCTTGATAACCTAGATTACCACCTTATCTCTTC
ATCCTATTGTGTTTAGAATG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNIIVLNSKRGHSRTLPVPRHWPWLLAVVLVAFPVLIGVSAYLLAYRVGGQPEFASMMTKRFASQLEQQQLALSELDQQS
QEQFRALTLKLAQAQARLVRLDALGERLVEVADIGGDEFDFSSVPGVGGPEASEEGASYELPSFMVALDQMTTTLERRER
QLDILEDLLADKQLEDQTYLSGRPLTKGWMSSRFGRRSDPFSGRVAWHKGVDFAGKEGTPIVATGAGVVTYSGERSGYGK
MVEINHGNGLSTRYGHAMELLVEPGEIVRTGDVVGKVGSSGRSTGPHVHYEVLKNGAQVNPQPYIYRARR

Sequences:

>Translated_310_residues
MNIIVLNSKRGHSRTLPVPRHWPWLLAVVLVAFPVLIGVSAYLLAYRVGGQPEFASMMTKRFASQLEQQQLALSELDQQS
QEQFRALTLKLAQAQARLVRLDALGERLVEVADIGGDEFDFSSVPGVGGPEASEEGASYELPSFMVALDQMTTTLERRER
QLDILEDLLADKQLEDQTYLSGRPLTKGWMSSRFGRRSDPFSGRVAWHKGVDFAGKEGTPIVATGAGVVTYSGERSGYGK
MVEINHGNGLSTRYGHAMELLVEPGEIVRTGDVVGKVGSSGRSTGPHVHYEVLKNGAQVNPQPYIYRARR
>Mature_310_residues
MNIIVLNSKRGHSRTLPVPRHWPWLLAVVLVAFPVLIGVSAYLLAYRVGGQPEFASMMTKRFASQLEQQQLALSELDQQS
QEQFRALTLKLAQAQARLVRLDALGERLVEVADIGGDEFDFSSVPGVGGPEASEEGASYELPSFMVALDQMTTTLERRER
QLDILEDLLADKQLEDQTYLSGRPLTKGWMSSRFGRRSDPFSGRVAWHKGVDFAGKEGTPIVATGAGVVTYSGERSGYGK
MVEINHGNGLSTRYGHAMELLVEPGEIVRTGDVVGKVGSSGRSTGPHVHYEVLKNGAQVNPQPYIYRARR

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=47.787610619469, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082297, Length=112, Percent_Identity=35.7142857142857, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=32.2033898305085, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87082174, Length=120, Percent_Identity=30, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34098; Mature: 34098

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIVLNSKRGHSRTLPVPRHWPWLLAVVLVAFPVLIGVSAYLLAYRVGGQPEFASMMTK
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFASQLEQQQLALSELDQQSQEQFRALTLKLAQAQARLVRLDALGERLVEVADIGGDEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FSSVPGVGGPEASEEGASYELPSFMVALDQMTTTLERRERQLDILEDLLADKQLEDQTYL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
SGRPLTKGWMSSRFGRRSDPFSGRVAWHKGVDFAGKEGTPIVATGAGVVTYSGERSGYGK
CCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCC
MVEINHGNGLSTRYGHAMELLVEPGEIVRTGDVVGKVGSSGRSTGPHVHYEVLKNGAQVN
EEEEECCCCCCCHHHHHHHEEECCCHHEECCHHHHCCCCCCCCCCCCEEHHHHHCCCCCC
PQPYIYRARR
CCCCEEECCC
>Mature Secondary Structure
MNIIVLNSKRGHSRTLPVPRHWPWLLAVVLVAFPVLIGVSAYLLAYRVGGQPEFASMMTK
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFASQLEQQQLALSELDQQSQEQFRALTLKLAQAQARLVRLDALGERLVEVADIGGDEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FSSVPGVGGPEASEEGASYELPSFMVALDQMTTTLERRERQLDILEDLLADKQLEDQTYL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
SGRPLTKGWMSSRFGRRSDPFSGRVAWHKGVDFAGKEGTPIVATGAGVVTYSGERSGYGK
CCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCC
MVEINHGNGLSTRYGHAMELLVEPGEIVRTGDVVGKVGSSGRSTGPHVHYEVLKNGAQVN
EEEEECCCCCCCHHHHHHHEEECCCHHEECCHHHHCCCCCCCCCCCCEEHHHHHCCCCCC
PQPYIYRARR
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]