| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833350
Identifier: 110833350
GI number: 110833350
Start: 537982
End: 538188
Strand: Direct
Name: 110833350
Synonym: ABO_0489
Alternate gene names: NA
Gene position: 537982-538188 (Clockwise)
Preceding gene: 110833348
Following gene: 110833351
Centisome position: 17.24
GC content: 47.83
Gene sequence:
>207_bases ATGACTAAGACAATTAGTTTCGGAGTAATGCATATTTCAGTGGCGTTCTTGGTCGTTTGGGCCATGACAGGTGACTGGCG TATTGGTGGTTTGACGGCTTTGGTTGAGCCTTGTGTGAATACCGTGGCCTACCACTTTCATGAAAAAATCTGGAAGACTA ACAAGAAGGCTGACCCTGCCCCGGTGAGCGGAGCGATTATGGTTTAG
Upstream 100 bases:
>100_bases GATTGTTTGCTATTTGATGTGTCTATCGATGCTATTTATCAAGAGCTTTATGCTATGCGAATGGAGTGAGGCATGATGGG CTTCAATTGGAGGGTATGTC
Downstream 100 bases:
>100_bases GATAAACTCAATGTTTACTCTGCTAGGGCCGTTAGTTAAGCTACCGAAGGCTATAGATTTTAAGGGGCGTCACGTGCAGA GACCAAGCAGCGACATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MTKTISFGVMHISVAFLVVWAMTGDWRIGGLTALVEPCVNTVAYHFHEKIWKTNKKADPAPVSGAIMV
Sequences:
>Translated_68_residues MTKTISFGVMHISVAFLVVWAMTGDWRIGGLTALVEPCVNTVAYHFHEKIWKTNKKADPAPVSGAIMV >Mature_67_residues TKTISFGVMHISVAFLVVWAMTGDWRIGGLTALVEPCVNTVAYHFHEKIWKTNKKADPAPVSGAIMV
Specific function: Unknown
COG id: COG3205
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7474; Mature: 7343
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTISFGVMHISVAFLVVWAMTGDWRIGGLTALVEPCVNTVAYHFHEKIWKTNKKADPA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVSGAIMV CCCCEEEC >Mature Secondary Structure TKTISFGVMHISVAFLVVWAMTGDWRIGGLTALVEPCVNTVAYHFHEKIWKTNKKADPA CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVSGAIMV CCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA