| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833348
Identifier: 110833348
GI number: 110833348
Start: 536350
End: 536889
Strand: Direct
Name: 110833348
Synonym: ABO_0487
Alternate gene names: NA
Gene position: 536350-536889 (Clockwise)
Preceding gene: 110833347
Following gene: 110833350
Centisome position: 17.19
GC content: 48.52
Gene sequence:
>540_bases ATGCTGTTGTATATCGCCATTGTTATCTCTGTTCTTGCGTTAGTTATCTATCGCTATCGTAAGCTGATGTACCACTTTCG TGTGGTGGAACGGAGAAAACTTTACCGTAGCGGAACCTTGGGGCCTATCGGTATACGAATCATGCATCGTATTTTGGGCG TTAACACAATTGTTAATCTACGCCTTGAGTCGGAGTACAGTAAAAACGGTTGGTACTTTAAACAGTTGGATTATTGTCGC CGGCATGGAGTGAAGCTTGTGAATATCCCCATGGCGCAGGATACACCGCCAACTGAGGCTCAAATTGTGGCATTTATTGA AGAGTTGGGTCGGGCAGACAGCCGCTGCTTGGTGCATTGTGAGATGGGGGTGATTCGTACAGGGATGATGGTGGTAGCAG TGGCGACTCGCTGTTATGGGGTAACCGAGATGGCGGTATGGCAGCACTTTCCACTATATGGCCACAAACTAGATAGACGG CGACAAAAGGTCCGAGAGTTTATTCAGCTCTGTGGCCGTGCGCACAAGGCTTCAGCCTAA
Upstream 100 bases:
>100_bases GCCCTCGTAGCTTAGCCGGAGCAGTAATGATTACCCTGTAATCACTCTGCCAACATCGCCCGGCATTATTCGCTTACCTT CAATGCCGGGAGTCTTCGTC
Downstream 100 bases:
>100_bases CAGTGGACAGCCCTCGGGCAGGTAAAGGCGCAGCGCATTGCGAATGGCTTGAATCTGAAAAGTTGTATTCTGAATTGGTT CACCATCCAGGTTCAGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MLLYIAIVISVLALVIYRYRKLMYHFRVVERRKLYRSGTLGPIGIRIMHRILGVNTIVNLRLESEYSKNGWYFKQLDYCR RHGVKLVNIPMAQDTPPTEAQIVAFIEELGRADSRCLVHCEMGVIRTGMMVVAVATRCYGVTEMAVWQHFPLYGHKLDRR RQKVREFIQLCGRAHKASA
Sequences:
>Translated_179_residues MLLYIAIVISVLALVIYRYRKLMYHFRVVERRKLYRSGTLGPIGIRIMHRILGVNTIVNLRLESEYSKNGWYFKQLDYCR RHGVKLVNIPMAQDTPPTEAQIVAFIEELGRADSRCLVHCEMGVIRTGMMVVAVATRCYGVTEMAVWQHFPLYGHKLDRR RQKVREFIQLCGRAHKASA >Mature_179_residues MLLYIAIVISVLALVIYRYRKLMYHFRVVERRKLYRSGTLGPIGIRIMHRILGVNTIVNLRLESEYSKNGWYFKQLDYCR RHGVKLVNIPMAQDTPPTEAQIVAFIEELGRADSRCLVHCEMGVIRTGMMVVAVATRCYGVTEMAVWQHFPLYGHKLDRR RQKVREFIQLCGRAHKASA
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20826; Mature: 20826
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS00383 TYR_PHOSPHATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYIAIVISVLALVIYRYRKLMYHFRVVERRKLYRSGTLGPIGIRIMHRILGVNTIVNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE RLESEYSKNGWYFKQLDYCRRHGVKLVNIPMAQDTPPTEAQIVAFIEELGRADSRCLVHC EECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE EMGVIRTGMMVVAVATRCYGVTEMAVWQHFPLYGHKLDRRRQKVREFIQLCGRAHKASA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHCCCCC >Mature Secondary Structure MLLYIAIVISVLALVIYRYRKLMYHFRVVERRKLYRSGTLGPIGIRIMHRILGVNTIVNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE RLESEYSKNGWYFKQLDYCRRHGVKLVNIPMAQDTPPTEAQIVAFIEELGRADSRCLVHC EECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE EMGVIRTGMMVVAVATRCYGVTEMAVWQHFPLYGHKLDRRRQKVREFIQLCGRAHKASA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA