| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110833308
Identifier: 110833308
GI number: 110833308
Start: 489643
End: 490062
Strand: Direct
Name: 110833308
Synonym: ABO_0447
Alternate gene names: NA
Gene position: 489643-490062 (Clockwise)
Preceding gene: 110833307
Following gene: 110833309
Centisome position: 15.69
GC content: 56.43
Gene sequence:
>420_bases ATGGCCATGCTTCATCCTCGCCTAGCTGCCGATACCGGTGCTTTGGGAGAAACAGATTTGTGCTGGTTGCGTTGGATGAA CGATCAGCGTTTTGCTTGGATTATCGTGGTGCCCAAGCGTGACGGGCTACGAGAGTGGCACCATTTGCCGATGGATGAAC AGCAGGCGCTGTTGGCGCAGGTGAATGACTTGGCCGGTCAGCTTGAGCGTATTACTGATGCGGATAAGATCAATATCGGT GCGTTGGGAAACATGGTGCCGCAGCTGCATATCCATATCATTGCCCGCTATGTCGATGACCCTTGCTGGCCTGGCCCGGT ATGGGGGCAAGGGACGCCGCAACCTTGGGCGGACGGTCAAGTGCCGGTTTGGATTGCTGAGTTGGCGTTGGCGGACGGTG TAATCACGGGAGGCTGTTGA
Upstream 100 bases:
>100_bases AGGTTGAACCCTGGCGGGGGGGGGGATTGTTTCAATGTCGGTGGGATGACGGCTTAGTTGGTCGTTCCTGTAGCCAGCAA TAGTCAGTTAAGGACATATT
Downstream 100 bases:
>100_bases TGGCTGAGTTGTTGCCAGCGACCGTGCAGTGTCCCCATTGCTGGGAGTCCATCGAGGTTTTGGTGGACCCCTCTGTGGAG GAACAGGAGTACGTGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAMLHPRLAADTGALGETDLCWLRWMNDQRFAWIIVVPKRDGLREWHHLPMDEQQALLAQVNDLAGQLERITDADKINIG ALGNMVPQLHIHIIARYVDDPCWPGPVWGQGTPQPWADGQVPVWIAELALADGVITGGC
Sequences:
>Translated_139_residues MAMLHPRLAADTGALGETDLCWLRWMNDQRFAWIIVVPKRDGLREWHHLPMDEQQALLAQVNDLAGQLERITDADKINIG ALGNMVPQLHIHIIARYVDDPCWPGPVWGQGTPQPWADGQVPVWIAELALADGVITGGC >Mature_138_residues AMLHPRLAADTGALGETDLCWLRWMNDQRFAWIIVVPKRDGLREWHHLPMDEQQALLAQVNDLAGQLERITDADKINIGA LGNMVPQLHIHIIARYVDDPCWPGPVWGQGTPQPWADGQVPVWIAELALADGVITGGC
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15461; Mature: 15330
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLHPRLAADTGALGETDLCWLRWMNDQRFAWIIVVPKRDGLREWHHLPMDEQQALLAQ CCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHH VNDLAGQLERITDADKINIGALGNMVPQLHIHIIARYVDDPCWPGPVWGQGTPQPWADGQ HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VPVWIAELALADGVITGGC CCHHHHHHHHHCCEEECCC >Mature Secondary Structure AMLHPRLAADTGALGETDLCWLRWMNDQRFAWIIVVPKRDGLREWHHLPMDEQQALLAQ CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHH VNDLAGQLERITDADKINIGALGNMVPQLHIHIIARYVDDPCWPGPVWGQGTPQPWADGQ HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VPVWIAELALADGVITGGC CCHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA