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The map label for this gene is oruR [H]

Identifier: 110833307

GI number: 110833307

Start: 488507

End: 489523

Strand: Direct

Name: oruR [H]

Synonym: ABO_0446

Alternate gene names: 110833307

Gene position: 488507-489523 (Clockwise)

Preceding gene: 110833304

Following gene: 110833308

Centisome position: 15.66

GC content: 55.46

Gene sequence:

>1017_bases
ATGACAATTCTAAAAATGGATCCGGAGGAATACTCCGTGTCGGCGGAATATCTAGCCTTGTTGTTGGCGGTCTTATCCCG
CCGTGGTGTTGCCACTGAGACTTTGCTTGAAGGCACTCGAATCGAGCCCGGCTGTTGGCGTAATCCGCAGGCGCGGATCA
CCGCGCAGGATTTTGAAAGGGTCGCCATCCGCGCCATCGAGCTGTCCGGGGAGCCCTGGCTGGGTTGGGAGCTTGGTGCG
TCGATGACGCTATCTTCTCACGGTTTTCTTGGTTACGCCGCCATGAGCAGCGCTACCCTGGGTGAGGCACTGGAGTTGGC
GGTTAAATATTTCCGCACCCGCAGCACCTTGGTGCAGCTGGAAACCTTTACTGATGGCGACATGGCGGTCATGCAGATTA
ATGAATTGCTGGCGCTGGGAGAGCTGGCTCCGCTGATTATGGAAAGCCTGTTTTCAAGCTTCCATTTTATGGGTGAAAAG
CTGGTTCCGGGGCAGGAAGTGATTGGTGAGCTGCGTTTCTCTTATCCAGAGCCTGACTATTTTGCTCGCTTGCGGCCGGT
GATGCCGGTGCCAGTGTATTTCGATTGTGCCTACAATCAAATGCGCTTTCCGGTGGAGCGCATGAAATACACTTTACAGT
TTGCGGATCCGCGTCTGGCCAGAATGGCGGCAGATCAATGTGAGCAGGAAATGGCGACGATCAAGTTGCCGCCGCCTTTG
TTGGGGCAGGTGCGGCGGATCATTCTGGGTGGCGGTGGCCGCTTCCCTGGGGTGGAAGAGGTAGCTGGTGAGCTGCATAT
GTCGTCACGCACCTTGAAACGCAAGCTGCAGCAATTAGGTACCAGTTACCAAGAGGTGCTGGATGGGTTACGTAAAGGTC
TGGCGGTGGAATATCTGACTCAGTCCGAGAAAACCGTAGATGAAATAGCGATGACGCTGGGCTATTCCGATGCCTCCAAC
TTTGCACGTGCTTTTCGGCGCTGGACGGCCCGTAGCCCGTCGGATTACCGGCCATAG

Upstream 100 bases:

>100_bases
GTTGGCAAGTGAACAGGAGTTACTTGTCACCGTTGCGTGGTGAGGTTATGGTTGTCTATTCGGTCATTTTGGGCCAGCGC
AGTGTAATCGGAATGCAGTC

Downstream 100 bases:

>100_bases
AATCGCCCCGTGAGGTTAGAGGTTGAACCCTGGCGGGGGGGGGGATTGTTTCAATGTCGGTGGGATGACGGCTTAGTTGG
TCGTTCCTGTAGCCAGCAAT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTILKMDPEEYSVSAEYLALLLAVLSRRGVATETLLEGTRIEPGCWRNPQARITAQDFERVAIRAIELSGEPWLGWELGA
SMTLSSHGFLGYAAMSSATLGEALELAVKYFRTRSTLVQLETFTDGDMAVMQINELLALGELAPLIMESLFSSFHFMGEK
LVPGQEVIGELRFSYPEPDYFARLRPVMPVPVYFDCAYNQMRFPVERMKYTLQFADPRLARMAADQCEQEMATIKLPPPL
LGQVRRIILGGGGRFPGVEEVAGELHMSSRTLKRKLQQLGTSYQEVLDGLRKGLAVEYLTQSEKTVDEIAMTLGYSDASN
FARAFRRWTARSPSDYRP

Sequences:

>Translated_338_residues
MTILKMDPEEYSVSAEYLALLLAVLSRRGVATETLLEGTRIEPGCWRNPQARITAQDFERVAIRAIELSGEPWLGWELGA
SMTLSSHGFLGYAAMSSATLGEALELAVKYFRTRSTLVQLETFTDGDMAVMQINELLALGELAPLIMESLFSSFHFMGEK
LVPGQEVIGELRFSYPEPDYFARLRPVMPVPVYFDCAYNQMRFPVERMKYTLQFADPRLARMAADQCEQEMATIKLPPPL
LGQVRRIILGGGGRFPGVEEVAGELHMSSRTLKRKLQQLGTSYQEVLDGLRKGLAVEYLTQSEKTVDEIAMTLGYSDASN
FARAFRRWTARSPSDYRP
>Mature_337_residues
TILKMDPEEYSVSAEYLALLLAVLSRRGVATETLLEGTRIEPGCWRNPQARITAQDFERVAIRAIELSGEPWLGWELGAS
MTLSSHGFLGYAAMSSATLGEALELAVKYFRTRSTLVQLETFTDGDMAVMQINELLALGELAPLIMESLFSSFHFMGEKL
VPGQEVIGELRFSYPEPDYFARLRPVMPVPVYFDCAYNQMRFPVERMKYTLQFADPRLARMAADQCEQEMATIKLPPPLL
GQVRRIILGGGGRFPGVEEVAGELHMSSRTLKRKLQQLGTSYQEVLDGLRKGLAVEYLTQSEKTVDEIAMTLGYSDASNF
ARAFRRWTARSPSDYRP

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37962; Mature: 37831

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILKMDPEEYSVSAEYLALLLAVLSRRGVATETLLEGTRIEPGCWRNPQARITAQDFER
CCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHH
VAIRAIELSGEPWLGWELGASMTLSSHGFLGYAAMSSATLGEALELAVKYFRTRSTLVQL
HHHHEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ETFTDGDMAVMQINELLALGELAPLIMESLFSSFHFMGEKLVPGQEVIGELRFSYPEPDY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
FARLRPVMPVPVYFDCAYNQMRFPVERMKYTLQFADPRLARMAADQCEQEMATIKLPPPL
HHHHCCCCCCCEEEECCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHH
LGQVRRIILGGGGRFPGVEEVAGELHMSSRTLKRKLQQLGTSYQEVLDGLRKGLAVEYLT
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHH
QSEKTVDEIAMTLGYSDASNFARAFRRWTARSPSDYRP
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TILKMDPEEYSVSAEYLALLLAVLSRRGVATETLLEGTRIEPGCWRNPQARITAQDFER
CEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHH
VAIRAIELSGEPWLGWELGASMTLSSHGFLGYAAMSSATLGEALELAVKYFRTRSTLVQL
HHHHEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ETFTDGDMAVMQINELLALGELAPLIMESLFSSFHFMGEKLVPGQEVIGELRFSYPEPDY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
FARLRPVMPVPVYFDCAYNQMRFPVERMKYTLQFADPRLARMAADQCEQEMATIKLPPPL
HHHHCCCCCCCEEEECCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHH
LGQVRRIILGGGGRFPGVEEVAGELHMSSRTLKRKLQQLGTSYQEVLDGLRKGLAVEYLT
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHH
QSEKTVDEIAMTLGYSDASNFARAFRRWTARSPSDYRP
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]