Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is apr [H]

Identifier: 110681130

GI number: 110681130

Start: 3859192

End: 3860187

Strand: Direct

Name: apr [H]

Synonym: RD1_4002

Alternate gene names: 110681130

Gene position: 3859192-3860187 (Clockwise)

Preceding gene: 110681128

Following gene: 110681132

Centisome position: 93.37

GC content: 65.26

Gene sequence:

>996_bases
ATGCGCGTGGCCGGGGCTGCGGGAGGATATCAACTGCTGGATGAAACCGATCTGGCCGGGCTTGATCTGACCATGCTGAC
TTTCCGGATGCCCGACGGCATCACCGGACCCGAAGCCATCGCGGCGCTCGAAGCGGACGTGCCGACATCGACCGTGGGCA
TCAACCACGCCTATAGGCTGCAGCAATCGACGAGTCCCGTGCAGACCCTCGACTATGCCAATGCGATGATGCGGTGGCAT
GCGGATGGATGTCGCGCGCAGGTGCCAATGGGTGTGATTGACACGGGCATCGACACCGCCAGCCCTGCCCTGAACAGCGC
ACGCATCATCACACGCGCGTTCTTTGAGGGCCCGGCTGCACCGGCTGCACATGGCACGGATGTCGCCTCGGTTCTGGCCA
GCCCCAGCCGCCTGCAAGGGGTCACGATTTACGGCGCGAATGTCTTCGGGCAGCAGGACGCCCTCGGGCTGAAGGCGGGT
GCGGACGCCTTGGTGCGTGCGCTTGACTGGCTGGCGGCGGAAGACGTGCGTTTTGTCAATCTGGCCCTCGCCGGGCCTTA
CAACAAGCTGCTCGACCTTGCTGTGGAACGCTCGGTTGCGCGGGGTCTGATCCTTGTCGCCGCTGTTGGCAATGAAGGGC
CAAACGTTGATCCGCTCTACCCCGCCGGATTTGACGGGGTGATTGCGGTGACCGCCGTGGATGCCGACGGGCGCATCTAT
CGCAACGCAGTGCGTGGCCCGCATGTGGACATCGCCGCGCCCGGTGTCGACGTCCTCGTGCCATCCGGTGACAGCGTTCG
GTTCGTGACAGGCACGTCGATCGCGACCCCGCTGGTCACGGCCCGACTGGCCGCTGATCCGACACTTGCCAGCGCACGCA
GCGTTTCCGACGTGCGCAAGCGACTGGCCGCAACCAGTGCGGAACTTGGACCAAGCGGACGCGACCCGGTCTATGGCTAT
GGGCTCGCGCTTGCCGAAGACGTCTGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CTGCGCGCCTTTGACAGACACCCGCGGCACAGGGGAGACAAATGTGGTCGGGCCGCGCAAGGTCATTGCGCTGGTTCCGG
ATGCGCAGGCGCGCGATGCG

Downstream 100 bases:

>100_bases
TCGCGGGCGCTTACATACACGCCGCCAGCGCCGTGGCGAGGTTCCCGATGAGCAGGGGATAAAGCGCCGGACCGGGTTCA
AGGTCCGAACCAAGCGGGTC

Product: subtilisin carlsberg precursor, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRVAGAAGGYQLLDETDLAGLDLTMLTFRMPDGITGPEAIAALEADVPTSTVGINHAYRLQQSTSPVQTLDYANAMMRWH
ADGCRAQVPMGVIDTGIDTASPALNSARIITRAFFEGPAAPAAHGTDVASVLASPSRLQGVTIYGANVFGQQDALGLKAG
ADALVRALDWLAAEDVRFVNLALAGPYNKLLDLAVERSVARGLILVAAVGNEGPNVDPLYPAGFDGVIAVTAVDADGRIY
RNAVRGPHVDIAAPGVDVLVPSGDSVRFVTGTSIATPLVTARLAADPTLASARSVSDVRKRLAATSAELGPSGRDPVYGY
GLALAEDVCGG

Sequences:

>Translated_331_residues
MRVAGAAGGYQLLDETDLAGLDLTMLTFRMPDGITGPEAIAALEADVPTSTVGINHAYRLQQSTSPVQTLDYANAMMRWH
ADGCRAQVPMGVIDTGIDTASPALNSARIITRAFFEGPAAPAAHGTDVASVLASPSRLQGVTIYGANVFGQQDALGLKAG
ADALVRALDWLAAEDVRFVNLALAGPYNKLLDLAVERSVARGLILVAAVGNEGPNVDPLYPAGFDGVIAVTAVDADGRIY
RNAVRGPHVDIAAPGVDVLVPSGDSVRFVTGTSIATPLVTARLAADPTLASARSVSDVRKRLAATSAELGPSGRDPVYGY
GLALAEDVCGG
>Mature_331_residues
MRVAGAAGGYQLLDETDLAGLDLTMLTFRMPDGITGPEAIAALEADVPTSTVGINHAYRLQQSTSPVQTLDYANAMMRWH
ADGCRAQVPMGVIDTGIDTASPALNSARIITRAFFEGPAAPAAHGTDVASVLASPSRLQGVTIYGANVFGQQDALGLKAG
ADALVRALDWLAAEDVRFVNLALAGPYNKLLDLAVERSVARGLILVAAVGNEGPNVDPLYPAGFDGVIAVTAVDADGRIY
RNAVRGPHVDIAAPGVDVLVPSGDSVRFVTGTSIATPLVTARLAADPTLASARSVSDVRKRLAATSAELGPSGRDPVYGY
GLALAEDVCGG

Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8 [H]

EC number: =3.4.21.62 [H]

Molecular weight: Translated: 34073; Mature: 34073

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAGAAGGYQLLDETDLAGLDLTMLTFRMPDGITGPEAIAALEADVPTSTVGINHAYRL
CCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCHHHHHEEECCCCCCEECCCCEEEE
QQSTSPVQTLDYANAMMRWHADGCRAQVPMGVIDTGIDTASPALNSARIITRAFFEGPAA
CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCC
PAAHGTDVASVLASPSRLQGVTIYGANVFGQQDALGLKAGADALVRALDWLAAEDVRFVN
CCCCCCHHHHHHCCHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
LALAGPYNKLLDLAVERSVARGLILVAAVGNEGPNVDPLYPAGFDGVIAVTAVDADGRIY
EEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHH
RNAVRGPHVDIAAPGVDVLVPSGDSVRFVTGTSIATPLVTARLAADPTLASARSVSDVRK
HHHCCCCCEEEECCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RLAATSAELGPSGRDPVYGYGLALAEDVCGG
HHHHHHHHCCCCCCCCCEEHHHHHHHHHCCC
>Mature Secondary Structure
MRVAGAAGGYQLLDETDLAGLDLTMLTFRMPDGITGPEAIAALEADVPTSTVGINHAYRL
CCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCHHHHHEEECCCCCCEECCCCEEEE
QQSTSPVQTLDYANAMMRWHADGCRAQVPMGVIDTGIDTASPALNSARIITRAFFEGPAA
CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCC
PAAHGTDVASVLASPSRLQGVTIYGANVFGQQDALGLKAGADALVRALDWLAAEDVRFVN
CCCCCCHHHHHHCCHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
LALAGPYNKLLDLAVERSVARGLILVAAVGNEGPNVDPLYPAGFDGVIAVTAVDADGRIY
EEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHH
RNAVRGPHVDIAAPGVDVLVPSGDSVRFVTGTSIATPLVTARLAADPTLASARSVSDVRK
HHHCCCCCEEEECCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RLAATSAELGPSGRDPVYGYGLALAEDVCGG
HHHHHHHHCCCCCCCCCEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6420308; 9826175 [H]