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The map label for this gene is ytxM [H]

Identifier: 110681066

GI number: 110681066

Start: 3792705

End: 3793529

Strand: Direct

Name: ytxM [H]

Synonym: RD1_3930

Alternate gene names: 110681066

Gene position: 3792705-3793529 (Clockwise)

Preceding gene: 110681065

Following gene: 110681067

Centisome position: 91.76

GC content: 57.82

Gene sequence:

>825_bases
ATGCCACATTTCACAACCTCAGACGGGCTTTCCCTCTATTACACAGACGAAGGCGACGGTTTGCCGATCCTTTGTCTGTC
GGGGCTGACGCGCACGTCAAAAGACTTCTCTTACGTGACACCCCACCTCAGTGGCGCGCGGTTGATCAAACTTGATTACC
GTGGGCGGGGCAATTCGGACTGGGACAAGAACTGGGAGAACTACAACCTGATCGTTGAAGCCCGCGACGTCATTGAATTG
CTCGATCATCTGGCGCTGGATCGCGTGGCGATCCTTGGCACGTCGCGCGGCGGGTTGCTGGCCATGGGTCTGGCCTTTGG
CGCCAAGGAACGGCTTCTGGGCGCAGCCCTCAATGACATCGGGCCGGTGATTGAACCCAAAGGGTTGGAGAACATCATGG
GTTATATTGGCCGCGCGCCCAAAGCGTCCAGCCACCTGACTGCAGCACGCCTGCTGGAACAGAACATGACCGGGTTTTCG
GACGTCCCTTTGACCCGCTGGATGGAAGAGGCGATCAAACACTACACCCGCAGCCGCAATGGCTTGGACATCACCTATGA
CCCCAAACTACGCGATGCCGTGGAATTGCAAGGCGCACAGGCCGCCCCCGACCTCTGGCCCTATTTCGACGCATTGTCCG
ATTTGCCTCTGGCGTGCATTCGCGGTGAAAACTCCGATCTGTTTTCGCATGAGACCCTGAAGGAGATGAAAAAACGTCGC
CCGGACATGATTTCAGCCACGGTGATCGGGCGGGGGCATGTGCCGTTTCTTGATGAACCGGAATCGGTGGCCGCACTGCA
AACATGGGTTGAGGCGCTCAAGTGA

Upstream 100 bases:

>100_bases
CATGGGTCAATCGCGCGAGTGACCCGGTGGACAGGTTGCCATGGCGCCCAGAACATGTGTTGAATGATTTGCGGAAAATC
CCCGAAATTGCAGGAATATA

Downstream 100 bases:

>100_bases
ACATCGACGCAATCCGGGCCGCTGAACAAAGGTTGAAAGGCCATGTGCGGCGCACGCCCCTGCTGTGTTCACCCAACCTC
GATGCGATCGCAGGGTGCCG

Product: hydrolase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MPHFTTSDGLSLYYTDEGDGLPILCLSGLTRTSKDFSYVTPHLSGARLIKLDYRGRGNSDWDKNWENYNLIVEARDVIEL
LDHLALDRVAILGTSRGGLLAMGLAFGAKERLLGAALNDIGPVIEPKGLENIMGYIGRAPKASSHLTAARLLEQNMTGFS
DVPLTRWMEEAIKHYTRSRNGLDITYDPKLRDAVELQGAQAAPDLWPYFDALSDLPLACIRGENSDLFSHETLKEMKKRR
PDMISATVIGRGHVPFLDEPESVAALQTWVEALK

Sequences:

>Translated_274_residues
MPHFTTSDGLSLYYTDEGDGLPILCLSGLTRTSKDFSYVTPHLSGARLIKLDYRGRGNSDWDKNWENYNLIVEARDVIEL
LDHLALDRVAILGTSRGGLLAMGLAFGAKERLLGAALNDIGPVIEPKGLENIMGYIGRAPKASSHLTAARLLEQNMTGFS
DVPLTRWMEEAIKHYTRSRNGLDITYDPKLRDAVELQGAQAAPDLWPYFDALSDLPLACIRGENSDLFSHETLKEMKKRR
PDMISATVIGRGHVPFLDEPESVAALQTWVEALK
>Mature_273_residues
PHFTTSDGLSLYYTDEGDGLPILCLSGLTRTSKDFSYVTPHLSGARLIKLDYRGRGNSDWDKNWENYNLIVEARDVIELL
DHLALDRVAILGTSRGGLLAMGLAFGAKERLLGAALNDIGPVIEPKGLENIMGYIGRAPKASSHLTAARLLEQNMTGFSD
VPLTRWMEEAIKHYTRSRNGLDITYDPKLRDAVELQGAQAAPDLWPYFDALSDLPLACIRGENSDLFSHETLKEMKKRRP
DMISATVIGRGHVPFLDEPESVAALQTWVEALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30383; Mature: 30252

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFTTSDGLSLYYTDEGDGLPILCLSGLTRTSKDFSYVTPHLSGARLIKLDYRGRGNSD
CCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCC
WDKNWENYNLIVEARDVIELLDHLALDRVAILGTSRGGLLAMGLAFGAKERLLGAALNDI
CCCCCCCEEEEEEHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHCHHHHHHHHHHHHH
GPVIEPKGLENIMGYIGRAPKASSHLTAARLLEQNMTGFSDVPLTRWMEEAIKHYTRSRN
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
GLDITYDPKLRDAVELQGAQAAPDLWPYFDALSDLPLACIRGENSDLFSHETLKEMKKRR
CCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHC
PDMISATVIGRGHVPFLDEPESVAALQTWVEALK
CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
PHFTTSDGLSLYYTDEGDGLPILCLSGLTRTSKDFSYVTPHLSGARLIKLDYRGRGNSD
CCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCC
WDKNWENYNLIVEARDVIELLDHLALDRVAILGTSRGGLLAMGLAFGAKERLLGAALNDI
CCCCCCCEEEEEEHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHCHHHHHHHHHHHHH
GPVIEPKGLENIMGYIGRAPKASSHLTAARLLEQNMTGFSDVPLTRWMEEAIKHYTRSRN
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
GLDITYDPKLRDAVELQGAQAAPDLWPYFDALSDLPLACIRGENSDLFSHETLKEMKKRR
CCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHC
PDMISATVIGRGHVPFLDEPESVAALQTWVEALK
CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]