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The map label for this gene is pcaC [H]

Identifier: 110680920

GI number: 110680920

Start: 3655601

End: 3655984

Strand: Direct

Name: pcaC [H]

Synonym: RD1_3773

Alternate gene names: 110680920

Gene position: 3655601-3655984 (Clockwise)

Preceding gene: 110680919

Following gene: 110680921

Centisome position: 88.45

GC content: 59.64

Gene sequence:

>384_bases
ATGAGCGACCGGTTTGAAGATGGCATGTCCATAAGGCGCGCCGTTCTCGGCGATGCGCATGTCGACAAGACAGAGGCCGA
GCGGCACCCGATTGAGACGCCGTTTCAGACGCTGATCACCGAAGCGGCATGGGGCACGGTCTGGGCCAGCGATGGCATCA
GCCTTCGCGAACGCTCCATGCTGACGCTCGCCCTGTTGGCGGCCACCAGAAATTTTGATGAAATCCCGATGCACATAAGG
GCCACCGCGCGTACAGGTGCCAGCCCGCAGGATGTGATGGAAGCCTTTCAGCATGTGGCCATCTATGCCGGGGTGCCTGC
GGCAAACCGCGCGATCAAACTTGCCAAGCAGACCTATGCGGAAATGGAAGATGCAGGTGAATGA

Upstream 100 bases:

>100_bases
CGCCGTTTTCATCTGAGGCGGCAACAGGGCATAAAGCCCCCTATTCAAAGTGCGCAATATTTGACAACCTGCCTGTGGCG
AACAGACGAGGGAGGCACCA

Downstream 100 bases:

>100_bases
GCAACCGCGCGCTGTCCCCCCGAAACTGGCAGGTGCATCCGCCCGCCCTTGCGCCGGCCTATAAAACCAGCCGGTTGCGC
GCACCTGCGCAGGCCCTCAT

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSDRFEDGMSIRRAVLGDAHVDKTEAERHPIETPFQTLITEAAWGTVWASDGISLRERSMLTLALLAATRNFDEIPMHIR
ATARTGASPQDVMEAFQHVAIYAGVPAANRAIKLAKQTYAEMEDAGE

Sequences:

>Translated_127_residues
MSDRFEDGMSIRRAVLGDAHVDKTEAERHPIETPFQTLITEAAWGTVWASDGISLRERSMLTLALLAATRNFDEIPMHIR
ATARTGASPQDVMEAFQHVAIYAGVPAANRAIKLAKQTYAEMEDAGE
>Mature_126_residues
SDRFEDGMSIRRAVLGDAHVDKTEAERHPIETPFQTLITEAAWGTVWASDGISLRERSMLTLALLAATRNFDEIPMHIRA
TARTGASPQDVMEAFQHVAIYAGVPAANRAIKLAKQTYAEMEDAGE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13986; Mature: 13855

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRFEDGMSIRRAVLGDAHVDKTEAERHPIETPFQTLITEAAWGTVWASDGISLRERSM
CCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHH
LTLALLAATRNFDEIPMHIRATARTGASPQDVMEAFQHVAIYAGVPAANRAIKLAKQTYA
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EMEDAGE
HHHCCCC
>Mature Secondary Structure 
SDRFEDGMSIRRAVLGDAHVDKTEAERHPIETPFQTLITEAAWGTVWASDGISLRERSM
CCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHH
LTLALLAATRNFDEIPMHIRATARTGASPQDVMEAFQHVAIYAGVPAANRAIKLAKQTYA
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EMEDAGE
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]