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The map label for this gene is ycjP [C]

Identifier: 110680892

GI number: 110680892

Start: 3629497

End: 3630372

Strand: Direct

Name: ycjP [C]

Synonym: RD1_3743

Alternate gene names: 110680892

Gene position: 3629497-3630372 (Clockwise)

Preceding gene: 110680891

Following gene: 110680899

Centisome position: 87.82

GC content: 59.13

Gene sequence:

>876_bases
ATGCCGACGAAATGGTGGGCCAGTCGGATTGCAATTTACGCTGCCCTGATCACATGGGCCTTTGTCTGTCTGTTCCCGAT
TTTCTGGACGATCACGACGTCGTTCAAACTCGCGCCCGACGTGATGAAGGGCAATATGATCCCATGGGTCGACTTCCAGC
CCAAATGGCGCGGCTGGGAAAGCCTCGGCCTGTCACCGCGTCTGATCGGTGAGGTTTCCACCGTGCGCGAAGAGTTCTTC
AAACGCTTCTGGAACAGTGCCATCGTCGCCGTTTCCGCCTCCACCCTTGCGGTCGTGCTTGGCTCGCTTGCGGCCTATGG
GCTGTCGCGGTTCAACTACCGCTTTGGATTCATGCGCAATTCCGACATCTCGTTCTTTTTCCTCAGCCAGATGATCCTGC
CCCCGGTGGTGCTGGCGCTGCCGTTTCTGGTGCTCTACCGCTCGCTGGACCTGTTGGACAGCCGCATCGGTCTGATCCTG
CTGTATACGCTGATGGTGCTGCCGATTGTCATCTGGATCATGCGCGACCAGTTTCAGGGCATCCCGGTGGAACTCGAAGA
GGCCGCATTGGTCGACGGGCTTGGCATCTGGGGCGCGTTCATGCAGATCGTCCTGCCCATCGCCCTGCCCGGCATGGTCG
CGGCCTTTATCCTCAGCCTCGTGCTGTGCTGGAACGAGTATTTCTTTGCCGCCCTTCTAACGGCCACGAACTCAACAACG
CTGCCGGTGATGGTGGCCTCTCAGACCGGATCGCAAGGCATCAACTGGTGGTCCATGGCCGCCCTGTCGACGGCGGCGAT
CTTCCCGTTGATCATCGTCGCGATCTTCCTTGAAAGATACATCATCAAGGGCATGGCGGCGGGCGCGGTGAAATAG

Upstream 100 bases:

>100_bases
TGATCGTCATTTTTGTCACGCTCCTGCTGAAACTCGTGAGCCGCTGGATGGAGCGCCCCGCATGACCGCAGTATTCAAGG
ATCACGAGGGCGACCAGCGC

Downstream 100 bases:

>100_bases
ACGCGCGGCAATCTCCGTCGTCAGCCCTCTGACGCGCGGGCTTCCTACCGCCAGCCTTTGTCCGATCCCGTCTGAAAGGT
GCCACGGTCGATGTGGATCA

Product: sugar ABC transporter, permease protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPTKWWASRIAIYAALITWAFVCLFPIFWTITTSFKLAPDVMKGNMIPWVDFQPKWRGWESLGLSPRLIGEVSTVREEFF
KRFWNSAIVAVSASTLAVVLGSLAAYGLSRFNYRFGFMRNSDISFFFLSQMILPPVVLALPFLVLYRSLDLLDSRIGLIL
LYTLMVLPIVIWIMRDQFQGIPVELEEAALVDGLGIWGAFMQIVLPIALPGMVAAFILSLVLCWNEYFFAALLTATNSTT
LPVMVASQTGSQGINWWSMAALSTAAIFPLIIVAIFLERYIIKGMAAGAVK

Sequences:

>Translated_291_residues
MPTKWWASRIAIYAALITWAFVCLFPIFWTITTSFKLAPDVMKGNMIPWVDFQPKWRGWESLGLSPRLIGEVSTVREEFF
KRFWNSAIVAVSASTLAVVLGSLAAYGLSRFNYRFGFMRNSDISFFFLSQMILPPVVLALPFLVLYRSLDLLDSRIGLIL
LYTLMVLPIVIWIMRDQFQGIPVELEEAALVDGLGIWGAFMQIVLPIALPGMVAAFILSLVLCWNEYFFAALLTATNSTT
LPVMVASQTGSQGINWWSMAALSTAAIFPLIIVAIFLERYIIKGMAAGAVK
>Mature_290_residues
PTKWWASRIAIYAALITWAFVCLFPIFWTITTSFKLAPDVMKGNMIPWVDFQPKWRGWESLGLSPRLIGEVSTVREEFFK
RFWNSAIVAVSASTLAVVLGSLAAYGLSRFNYRFGFMRNSDISFFFLSQMILPPVVLALPFLVLYRSLDLLDSRIGLILL
YTLMVLPIVIWIMRDQFQGIPVELEEAALVDGLGIWGAFMQIVLPIALPGMVAAFILSLVLCWNEYFFAALLTATNSTTL
PVMVASQTGSQGINWWSMAALSTAAIFPLIIVAIFLERYIIKGMAAGAVK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=300, Percent_Identity=29, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790464, Length=279, Percent_Identity=28.673835125448, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789860, Length=222, Percent_Identity=25.6756756756757, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32544; Mature: 32413

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKWWASRIAIYAALITWAFVCLFPIFWTITTSFKLAPDVMKGNMIPWVDFQPKWRGWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHCCCCCCCCCCCCCCCCHH
SLGLSPRLIGEVSTVREEFFKRFWNSAIVAVSASTLAVVLGSLAAYGLSRFNYRFGFMRN
HCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECEEEC
SDISFFFLSQMILPPVVLALPFLVLYRSLDLLDSRIGLILLYTLMVLPIVIWIMRDQFQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPVELEEAALVDGLGIWGAFMQIVLPIALPGMVAAFILSLVLCWNEYFFAALLTATNSTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LPVMVASQTGSQGINWWSMAALSTAAIFPLIIVAIFLERYIIKGMAAGAVK
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTKWWASRIAIYAALITWAFVCLFPIFWTITTSFKLAPDVMKGNMIPWVDFQPKWRGWE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHCCCCCCCCCCCCCCCCHH
SLGLSPRLIGEVSTVREEFFKRFWNSAIVAVSASTLAVVLGSLAAYGLSRFNYRFGFMRN
HCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECEEEC
SDISFFFLSQMILPPVVLALPFLVLYRSLDLLDSRIGLILLYTLMVLPIVIWIMRDQFQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPVELEEAALVDGLGIWGAFMQIVLPIALPGMVAAFILSLVLCWNEYFFAALLTATNSTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LPVMVASQTGSQGINWWSMAALSTAAIFPLIIVAIFLERYIIKGMAAGAVK
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]