Click here to switch to the map view.

The map label for this gene is 110680852

Identifier: 110680852

GI number: 110680852

Start: 3570142

End: 3570522

Strand: Direct

Name: 110680852

Synonym: RD1_3701

Alternate gene names: NA

Gene position: 3570142-3570522 (Clockwise)

Preceding gene: 110680850

Following gene: 110680853

Centisome position: 86.38

GC content: 56.43

Gene sequence:

>381_bases
GTGCCGCTTTGTGAACGTGGCCTGAGCACATCTTTCTTGGCATTTCGTCCACCATTCCGGTTTCGAAACGGGAACACCCG
GTACTGTCGAACCTGTGCCCAGACCCGCGAACATACGGCTTTATCACGCCGTTTGACGAAACCTTTCCACCTGCACTACA
GTCGCTTTCGAAGGCGGGGGAGGTCTGAGGTGAAGAGAGCTGGGCGCAACGTTATGTCCCGAGCCAAAGGCGCAATGGAG
CGGTGCAAACACAGCTTTGGCATCGCCCATGGTCCCTTTCACAGGAACACTGTCGCAAACAAGACCGCGAACACGTTTGG
GCGGATGTCCAGCGCACAGCGCACCGTCAGCCAGTTGCATAAGAGGAATAGACACGCATGA

Upstream 100 bases:

>100_bases
TCTGAAGTGTCTCGAACTTCATCGCCACCCCTACTCCGAAACCCCCGCTATAGGTGCTTTTGGTTAGGGTCTGGTGAACG
ATTGCCTAAAATTGTTCGCA

Downstream 100 bases:

>100_bases
CGCAGTTCATCAATAAAAAGGAAACGCTGGTCACCGATGCGATTGACGGGCTGTTGGCCAGTGCTGGCGGGTCGCTGCGG
CGTCTGGACGGCTATCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPLCERGLSTSFLAFRPPFRFRNGNTRYCRTCAQTREHTALSRRLTKPFHLHYSRFRRRGRSEVKRAGRNVMSRAKGAME
RCKHSFGIAHGPFHRNTVANKTANTFGRMSSAQRTVSQLHKRNRHA

Sequences:

>Translated_126_residues
MPLCERGLSTSFLAFRPPFRFRNGNTRYCRTCAQTREHTALSRRLTKPFHLHYSRFRRRGRSEVKRAGRNVMSRAKGAME
RCKHSFGIAHGPFHRNTVANKTANTFGRMSSAQRTVSQLHKRNRHA
>Mature_125_residues
PLCERGLSTSFLAFRPPFRFRNGNTRYCRTCAQTREHTALSRRLTKPFHLHYSRFRRRGRSEVKRAGRNVMSRAKGAMER
CKHSFGIAHGPFHRNTVANKTANTFGRMSSAQRTVSQLHKRNRHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14672; Mature: 14541

Theoretical pI: Translated: 12.55; Mature: 12.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLCERGLSTSFLAFRPPFRFRNGNTRYCRTCAQTREHTALSRRLTKPFHLHYSRFRRRG
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RSEVKRAGRNVMSRAKGAMERCKHSFGIAHGPFHRNTVANKTANTFGRMSSAQRTVSQLH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRNRHA
HHCCCC
>Mature Secondary Structure 
PLCERGLSTSFLAFRPPFRFRNGNTRYCRTCAQTREHTALSRRLTKPFHLHYSRFRRRG
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RSEVKRAGRNVMSRAKGAMERCKHSFGIAHGPFHRNTVANKTANTFGRMSSAQRTVSQLH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRNRHA
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA