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The map label for this gene is torT [H]

Identifier: 110680820

GI number: 110680820

Start: 3532511

End: 3533521

Strand: Direct

Name: torT [H]

Synonym: RD1_3668

Alternate gene names: 110680820

Gene position: 3532511-3533521 (Clockwise)

Preceding gene: 110680818

Following gene: 110680825

Centisome position: 85.47

GC content: 63.01

Gene sequence:

>1011_bases
GTGTCAAAACTCGTTCGTCGCATAACCGGACACTACGGGGCTACCGGTATCGGCACAATCGCCACATTCTGTCTGGCGCT
CACTCTGTCTGTGACGGCCCTGCCACCGTCGGCCGCGGCGCAGGCGCACAAGGTGTTTTGTGCCTTGGTGCCCCATTTCA
AGGATGAATACTGGCTCAGTGTCGGCTTTGGCCTTGAGCAGGAGGCGCAGCGCAACAACACAGACATTCTGTTCTTTGAG
GCGGGCGGGTATGGCGACCCGGCTGTGCAGATTGACCAGCTTGAGACCTGCGTGACGCGCGGGGTCGATGCGATTTTGAT
CGGGGCGGTGGCGTCCGATCATAACGGCCTGACAGAGGCGATTGAACGCGCGGCACGGGATGTCCCTGTCTTTGGACTGG
TCAACGCGGTGCACAGCGATGCGCTGGCCGGTCGTGTCGGTGTGGACTGGCGCGACATGGGATATCTTCTGGGCCAGCAC
CTGAGCACGCTGCATCCGGCAGGCTCGCCTGCGCAAACGGCCGTTCTTGTCACCGGCCCGGCCGGGTCCGGCTGGACGGG
TCCGCTGGAGGCCGGACTGCGCGAAGGGCTTGCCCGGAGTTCGGTGACGATCCTCGACGTGCTGGGTGCAGATACCGGCC
TGCGCCACCAGCTTGCGCTGAGCGAACAGGCGCTGGAACGCCACCCTGGTGCCAATTATCTGATCGGCAGCGCCCCGGCC
ATCGAGGCCGCGCTCGGTTTGCTGGCAACCCGCCCGCACAGGGACAAACCCGTTCTCGTGGCGACCTATGTCAACCACAC
GGTCAAACGTGGCCTGATGAACGCCAGTGTGCTGGCCGCGTCTTTTGATGACCCGATGGTGCAGGCCAGAATGGCGATTA
AAATGGCCGCTTCCGCGCCCGCGCGCAGTGCGCAGACCCTCGGACCGAAGGTTGTGGTTCTGACAAACAGTGACGATAAT
CTGACCGAAGTCCGCATGTCGCCCGCTGACTACTTTCCGGCGCTTCAATAG

Upstream 100 bases:

>100_bases
CGCCTCCTGCGTGCGCACCAGATAGCGGTTGACGCCAATCGCGACGAGGCCCACCATGATGGACAAAGCCGCCAAAGCGC
TCAGGATTTGAATAAGCCGC

Downstream 100 bases:

>100_bases
CGCCACTGCGGGGCAACGGACATATTCCCATGTGGATCACGTCCTGCGCCGGATCAGAAACGACAGGCACAAGGTGACGG
TCATGGCGGCGTAGGCGGCG

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSKLVRRITGHYGATGIGTIATFCLALTLSVTALPPSAAAQAHKVFCALVPHFKDEYWLSVGFGLEQEAQRNNTDILFFE
AGGYGDPAVQIDQLETCVTRGVDAILIGAVASDHNGLTEAIERAARDVPVFGLVNAVHSDALAGRVGVDWRDMGYLLGQH
LSTLHPAGSPAQTAVLVTGPAGSGWTGPLEAGLREGLARSSVTILDVLGADTGLRHQLALSEQALERHPGANYLIGSAPA
IEAALGLLATRPHRDKPVLVATYVNHTVKRGLMNASVLAASFDDPMVQARMAIKMAASAPARSAQTLGPKVVVLTNSDDN
LTEVRMSPADYFPALQ

Sequences:

>Translated_336_residues
MSKLVRRITGHYGATGIGTIATFCLALTLSVTALPPSAAAQAHKVFCALVPHFKDEYWLSVGFGLEQEAQRNNTDILFFE
AGGYGDPAVQIDQLETCVTRGVDAILIGAVASDHNGLTEAIERAARDVPVFGLVNAVHSDALAGRVGVDWRDMGYLLGQH
LSTLHPAGSPAQTAVLVTGPAGSGWTGPLEAGLREGLARSSVTILDVLGADTGLRHQLALSEQALERHPGANYLIGSAPA
IEAALGLLATRPHRDKPVLVATYVNHTVKRGLMNASVLAASFDDPMVQARMAIKMAASAPARSAQTLGPKVVVLTNSDDN
LTEVRMSPADYFPALQ
>Mature_335_residues
SKLVRRITGHYGATGIGTIATFCLALTLSVTALPPSAAAQAHKVFCALVPHFKDEYWLSVGFGLEQEAQRNNTDILFFEA
GGYGDPAVQIDQLETCVTRGVDAILIGAVASDHNGLTEAIERAARDVPVFGLVNAVHSDALAGRVGVDWRDMGYLLGQHL
STLHPAGSPAQTAVLVTGPAGSGWTGPLEAGLREGLARSSVTILDVLGADTGLRHQLALSEQALERHPGANYLIGSAPAI
EAALGLLATRPHRDKPVLVATYVNHTVKRGLMNASVLAASFDDPMVQARMAIKMAASAPARSAQTLGPKVVVLTNSDDNL
TEVRMSPADYFPALQ

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=309, Percent_Identity=33.0097087378641, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35328; Mature: 35196

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLVRRITGHYGATGIGTIATFCLALTLSVTALPPSAAAQAHKVFCALVPHFKDEYWLS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
VGFGLEQEAQRNNTDILFFEAGGYGDPAVQIDQLETCVTRGVDAILIGAVASDHNGLTEA
ECCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHCCCCCHHHH
IERAARDVPVFGLVNAVHSDALAGRVGVDWRDMGYLLGQHLSTLHPAGSPAQTAVLVTGP
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
AGSGWTGPLEAGLREGLARSSVTILDVLGADTGLRHQLALSEQALERHPGANYLIGSAPA
CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHH
IEAALGLLATRPHRDKPVLVATYVNHTVKRGLMNASVLAASFDDPMVQARMAIKMAASAP
HHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHCCC
ARSAQTLGPKVVVLTNSDDNLTEVRMSPADYFPALQ
CCCHHHCCCEEEEEECCCCCCEEEEECCHHCCCCCC
>Mature Secondary Structure 
SKLVRRITGHYGATGIGTIATFCLALTLSVTALPPSAAAQAHKVFCALVPHFKDEYWLS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
VGFGLEQEAQRNNTDILFFEAGGYGDPAVQIDQLETCVTRGVDAILIGAVASDHNGLTEA
ECCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHCCCCCHHHH
IERAARDVPVFGLVNAVHSDALAGRVGVDWRDMGYLLGQHLSTLHPAGSPAQTAVLVTGP
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
AGSGWTGPLEAGLREGLARSSVTILDVLGADTGLRHQLALSEQALERHPGANYLIGSAPA
CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHH
IEAALGLLATRPHRDKPVLVATYVNHTVKRGLMNASVLAASFDDPMVQARMAIKMAASAP
HHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHCCC
ARSAQTLGPKVVVLTNSDDNLTEVRMSPADYFPALQ
CCCHHHCCCEEEEEECCCCCCEEEEECCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]