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The map label for this gene is torR [H]

Identifier: 110680818

GI number: 110680818

Start: 3529076

End: 3529780

Strand: Direct

Name: torR [H]

Synonym: RD1_3665

Alternate gene names: 110680818

Gene position: 3529076-3529780 (Clockwise)

Preceding gene: 110680815

Following gene: 110680820

Centisome position: 85.39

GC content: 59.43

Gene sequence:

>705_bases
ATGCCCCAACACATCCTCATCATCGAAGACGACAGAACCACAAGAACAAGATTAGCCGCGTATCTGAGAGAACAGGGATA
CCGTGTCAGCGAGGCCGAAAACGCCGACACGATGGAACAGATCATCGCCGAAGATCCCCCGGAACTCCTGCTCATCGACA
TCAATCTGGAGGGCAAGGACGGGCTGACCATCACCCGCGAACAGCGCAGCGTCTCAAGGGTCGGGATCATCCTGCTGACG
GCACGCGACGATCAGGTGGACAAGATCGTCGGTCTGGAAATGGGCGCCGATGACTACATCACCAAGCCCTTTGACAAACG
TGAACTGGCCGCCAGGGTCAAGAATCTGCTCGCGCGGATTGCCGATATCGGACAGGCCCCGCAAGGCGCAGCACCCGTTG
AAGAATTCGGCCCATGGGCCTTTGACCGCATCCGGCGCAGGCTGGTTTCAGCGGCCCGCACCGAAACGCTGACCAAACAG
GAATTCGACGTCATGAGCGCGCTTGCCGATCACCCCGGTCAGACGCTCAGCCGGGCCCGGCTGGCCGAAATGATGGGCCG
TCGGGCGCTGCGCTCGAATGACCGGATGATTGATGTGGTCGTGGGTCGTTTGCGCAAGAAACTGGAACATGATCCCGCCA
ATCCCGAATGGATACTGACCGAACACGGTCGCGGCTATCATTTTGTCGATCCCGGCGCGATCTGA

Upstream 100 bases:

>100_bases
AGATTAAGATCTGCCCCCACACTACGATAACGCGAAACCTCAAACCTTGATCCGACGCAAACAGGGTTGTGCGAAAATGT
AAGCAAATGTAATAAAAACC

Downstream 100 bases:

>100_bases
AGCTCCGCCGCCTGTGCCGCCCTGTGCAGCACTGATTTTGCCTCCTGTGCTGCGTCTTTCAAAAGGCTGCGCAAGGCCGC
GTCCGCGCCGTTTTCTGCCG

Product: response regulator TorR, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPQHILIIEDDRTTRTRLAAYLREQGYRVSEAENADTMEQIIAEDPPELLLIDINLEGKDGLTITREQRSVSRVGIILLT
ARDDQVDKIVGLEMGADDYITKPFDKRELAARVKNLLARIADIGQAPQGAAPVEEFGPWAFDRIRRRLVSAARTETLTKQ
EFDVMSALADHPGQTLSRARLAEMMGRRALRSNDRMIDVVVGRLRKKLEHDPANPEWILTEHGRGYHFVDPGAI

Sequences:

>Translated_234_residues
MPQHILIIEDDRTTRTRLAAYLREQGYRVSEAENADTMEQIIAEDPPELLLIDINLEGKDGLTITREQRSVSRVGIILLT
ARDDQVDKIVGLEMGADDYITKPFDKRELAARVKNLLARIADIGQAPQGAAPVEEFGPWAFDRIRRRLVSAARTETLTKQ
EFDVMSALADHPGQTLSRARLAEMMGRRALRSNDRMIDVVVGRLRKKLEHDPANPEWILTEHGRGYHFVDPGAI
>Mature_233_residues
PQHILIIEDDRTTRTRLAAYLREQGYRVSEAENADTMEQIIAEDPPELLLIDINLEGKDGLTITREQRSVSRVGIILLTA
RDDQVDKIVGLEMGADDYITKPFDKRELAARVKNLLARIADIGQAPQGAAPVEEFGPWAFDRIRRRLVSAARTETLTKQE
FDVMSALADHPGQTLSRARLAEMMGRRALRSNDRMIDVVVGRLRKKLEHDPANPEWILTEHGRGYHFVDPGAI

Specific function: Member of the two-component regulatory system ArcB/ArcA. Represses a wide variety of aerobic enzymes under anaerobic conditions. It also may be involved in the osmoregulation of envelope proteins. When activated by ArcB, it negatively regulates the expres

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=43.2314410480349, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=41.7391304347826, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=41.1255411255411, Blast_Score=167, Evalue=6e-43,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=34.8214285714286, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786599, Length=234, Percent_Identity=32.4786324786325, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=34.3612334801762, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=34.453781512605, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=32.8888888888889, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=33.7719298245614, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=33.6206896551724, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=31.1111111111111, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=27.7533039647577, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=31.8385650224215, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=29.2035398230088, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26431; Mature: 26299

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQHILIIEDDRTTRTRLAAYLREQGYRVSEAENADTMEQIIAEDPPELLLIDINLEGKD
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC
GLTITREQRSVSRVGIILLTARDDQVDKIVGLEMGADDYITKPFDKRELAARVKNLLARI
CCEEEHHHHHHCEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ADIGQAPQGAAPVEEFGPWAFDRIRRRLVSAARTETLTKQEFDVMSALADHPGQTLSRAR
HHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAEMMGRRALRSNDRMIDVVVGRLRKKLEHDPANPEWILTEHGRGYHFVDPGAI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCC
>Mature Secondary Structure 
PQHILIIEDDRTTRTRLAAYLREQGYRVSEAENADTMEQIIAEDPPELLLIDINLEGKD
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC
GLTITREQRSVSRVGIILLTARDDQVDKIVGLEMGADDYITKPFDKRELAARVKNLLARI
CCEEEHHHHHHCEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ADIGQAPQGAAPVEEFGPWAFDRIRRRLVSAARTETLTKQEFDVMSALADHPGQTLSRAR
HHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAEMMGRRALRSNDRMIDVVVGRLRKKLEHDPANPEWILTEHGRGYHFVDPGAI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]