| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is egsA [H]
Identifier: 110680772
GI number: 110680772
Start: 3477980
End: 3479311
Strand: Direct
Name: egsA [H]
Synonym: RD1_3615
Alternate gene names: 110680772
Gene position: 3477980-3479311 (Clockwise)
Preceding gene: 110680770
Following gene: 110680773
Centisome position: 84.15
GC content: 58.63
Gene sequence:
>1332_bases ATGGGCCTAGCGGAAATAGACAGCCGCAACTGGACATCCCTCATTGACGATATTGTGACAGGCGACTTCTATGATGCCGA GGCTGGCAAGAAGGTGTCGGTTCCCTACGAATCCATCGTGTTCGAACAAAGCCTTGATGGGCAGGAAGAGGCGCTCATTT CCCGGCTTAAACTGGGCGAGAAGCTTGCGGTTGTCGCGGATGAAAACACCTATGACGTGCTTGGCGGGCGGGTCGCGCGC GCGCTGAAACGCATCGGCAGCGAGCCGGCAATCGTTCTGAAAAACCCCCATGCGGACATGCAGACAGCAGCCGCACTGGC GGACCAACTCAAGGGATATGACAGCGTCATCGCGGTCGGCTCAGGCACCCTCAACGATCTGTGCAAATACGTCACCGCAC AGGACGGGCGGCGCTATGCGGTGTTTGCCACTGCGGCCTCGATGAACGGATATACGTCAACCACGGCCAGCATGACACTG GATTCAGGTTTGAAGGTTTCGCTGCCCGCACAGGCGCCGGCGGGGTTCTTCGTGGATATGGCTGTCTCTGCCGCAGCACC TTCGCATCTTACCGCATCGGGGTTTGCAGACTGCATTGCCCGCTCGGTCGCGCAGGTCGATTGGTGGATGTCGCACCGCG TGCTCGGCACGCTTTATCGCTCCGTCCCGTTTGATATTCAAATCGCGGATGAAATCGAACTGAACAAATGTGCCCATCTT TTGCCGAAAGGCGATATCGAAGCAACGGCACGGCTTTATCGCGTATTGACGCTCTGTGGTCTGGGCATCGGGTTTATCGG CATGTCCAACCCCGGTTCCATGGGTGAGCATCAGATATCGCATTACATTGATTGCTTTGCAGGGGCGCGGCATCCCGGCA CGCTGCATGGGCAACAGGTGGGTGTGGCCAGCCTGACCATGGCGCGCATTCAGCAGGGGCTTCTGGCGCAGGATAACGCA CCGGTCATGAAACCGACGCCGATTGATACCGAAGGAATGAAACAGCGCATGGGGGGCGCCGCCGCCGACTGTATCCAACA ATTGCAGCGCAAGGCACTGGACGGCGACGCCTTGGACGCGGTCAATCAGAAACTGGCCGCCCTGTGGCCGGAGTTGCAGC GCGAATTGCGCCAATTCATGATCCCGGTCGAGGAGATGGAAAAACTGCTCTCGGATGCGGGCGCGCCGACGACCGCTGCG GACCTCGGGATTGACCTTGAATTTTACCGCGAGGCCGTGCGCCATGGACATGAGATGCGAGACAGGTTCTCCTTTGTCGA TATCGCCGCCAATGCCGGTCAGCTTGAGCAATTCATCGCAATCCAGACGTAG
Upstream 100 bases:
>100_bases AACGCTGATACAGATGTATATTTGTAATTTACATTTGTAAATATACTGCTAGGTTAAGCCGACTTTCGCACATCAATCCA GCAATGGGAGCAGCAACGCC
Downstream 100 bases:
>100_bases GCCATTTCAGGGGAGGGTAAGATGAGCACAAAACCATTGGTCGCAATTACGGGCGCCAGTTCCGGTATCGGGGCCGCCGT GGCAAAAACCTTTTCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase [H]
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVAR ALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTL DSGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNA PVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAA DLGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT
Sequences:
>Translated_443_residues MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVAR ALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTL DSGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNA PVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAA DLGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT >Mature_442_residues GLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGEKLAVVADENTYDVLGGRVARA LKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVGSGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLD SGLKVSLPAQAPAGFFVDMAVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHLL PKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQVGVASLTMARIQQGLLAQDNAP VMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDAVNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAAD LGIDLEFYREAVRHGHEMRDRFSFVDIAANAGQLEQFIAIQT
Specific function: Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol-1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species [H]
COG id: COG0371
COG function: function code C; Glycerol dehydrogenase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerol-1-phosphate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR023003 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =1.1.1.261 [H]
Molecular weight: Translated: 47750; Mature: 47619
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGE CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCC KLAVVADENTYDVLGGRVARALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVG EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC SGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLDSGLKVSLPAQAPAGFFVDM CCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEEECCCCEEEECCCCCCCHHHHH AVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQV CCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GVASLTMARIQQGLLAQDNAPVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH VNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAADLGIDLEFYREAVRHGHEMR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHH DRFSFVDIAANAGQLEQFIAIQT HHHHHHHHHCCCHHHHHHHEECC >Mature Secondary Structure GLAEIDSRNWTSLIDDIVTGDFYDAEAGKKVSVPYESIVFEQSLDGQEEALISRLKLGE CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCC KLAVVADENTYDVLGGRVARALKRIGSEPAIVLKNPHADMQTAAALADQLKGYDSVIAVG EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC SGTLNDLCKYVTAQDGRRYAVFATAASMNGYTSTTASMTLDSGLKVSLPAQAPAGFFVDM CCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEEECCCCEEEECCCCCCCHHHHH AVSAAAPSHLTASGFADCIARSVAQVDWWMSHRVLGTLYRSVPFDIQIADEIELNKCAHL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH LPKGDIEATARLYRVLTLCGLGIGFIGMSNPGSMGEHQISHYIDCFAGARHPGTLHGQQV CCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GVASLTMARIQQGLLAQDNAPVMKPTPIDTEGMKQRMGGAAADCIQQLQRKALDGDALDA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH VNQKLAALWPELQRELRQFMIPVEEMEKLLSDAGAPTTAADLGIDLEFYREAVRHGHEMR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHH DRFSFVDIAANAGQLEQFIAIQT HHHHHHHHHCCCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA