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The map label for this gene is 110680763

Identifier: 110680763

GI number: 110680763

Start: 3469686

End: 3470480

Strand: Direct

Name: 110680763

Synonym: RD1_3606

Alternate gene names: NA

Gene position: 3469686-3470480 (Clockwise)

Preceding gene: 110680762

Following gene: 110680767

Centisome position: 83.95

GC content: 58.24

Gene sequence:

>795_bases
GTGCTCGAGAATGCACTTACCCCGATTTCACTGGCGGATTTGAACGCCAAGGCTGAGATGCTGACGCGGCTGGACAATAA
ATATGTTGTGCCGCTGAGCGTTCTGGAGAGCCTCGCGCCCGTTCTTGGCGATCACTTTGATATTCTGGAAATCGATGGTA
CGCGACGGTTCGCCTATCGCACGCAGTATTTCGACACGCCCGACATGACGAGCTTTCGCCATCACGTGCAGGGGCGGCGG
CGACGGTCCAAGCTGCGCACGCGACACTACCTCAGCGCCGACATTTGTTTCGTCGAGGTAAAACTGAAGTCACTGCGGAA
AGTCACCGTCAAAAAGCGCCTGCCGCATGATCCCGATGCGTTGGACCAGTTGACGGACCCCGCGCTGCAATTCGCGGAGC
AATCCCACCTCGGCCACTACGGTCGGGGCCTGAATGCCCCCTATTTGCCGGTGATGCAGATGCAATATGAAAGGATGACG
CTGGTCGCCCGCGAGGGCGGTGAACGTCTGACCATTGATCGTAATCTGCAGTTCTGGAATGACAGGAATGAGGCGGCGAC
ATCACCCGAAATGGTCGTGATCGAAACAAAGTCAGCCTTTGGGAGGGGAATTGCAGACAGCATCCTGCGCCGCAACGGCT
CCCATCCGATCGGGTCCTGCTCCAAATATTGCATCGGTCTTGCCGCGATCGGACTTGTCCCGCGCTTCAACAGGTTCTTG
CCTGCTTTCCGGCGCCTCTTGCCTCATCTCGCGACCCCGCAATCTGCGCGCGTTGCGATGCCGCAGACCGCATGA

Upstream 100 bases:

>100_bases
GCGTGAATGTGACGGGGTTCGAAATCGTGAGCCTCAATTTCGTGAACGAACTGGCCATCGTGAGCCTCACCTACAACAGC
AAACAAAGGGATGTTTCATA

Downstream 100 bases:

>100_bases
CAGGTCGCGGTCGGCACCCGGCTGAAACGCGGGTAGGACTGTGAAGACAGGTCGCCAAATCTGGCGGGGTGCTGCGCCAC
AAAAAACACCGGCCATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: VTC Domain Protein; Facilitator Superfamily Protein; Peptidase Aspartic; PE-PGRS Family Protein; Catalase

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLENALTPISLADLNAKAEMLTRLDNKYVVPLSVLESLAPVLGDHFDILEIDGTRRFAYRTQYFDTPDMTSFRHHVQGRR
RRSKLRTRHYLSADICFVEVKLKSLRKVTVKKRLPHDPDALDQLTDPALQFAEQSHLGHYGRGLNAPYLPVMQMQYERMT
LVAREGGERLTIDRNLQFWNDRNEAATSPEMVVIETKSAFGRGIADSILRRNGSHPIGSCSKYCIGLAAIGLVPRFNRFL
PAFRRLLPHLATPQSARVAMPQTA

Sequences:

>Translated_264_residues
MLENALTPISLADLNAKAEMLTRLDNKYVVPLSVLESLAPVLGDHFDILEIDGTRRFAYRTQYFDTPDMTSFRHHVQGRR
RRSKLRTRHYLSADICFVEVKLKSLRKVTVKKRLPHDPDALDQLTDPALQFAEQSHLGHYGRGLNAPYLPVMQMQYERMT
LVAREGGERLTIDRNLQFWNDRNEAATSPEMVVIETKSAFGRGIADSILRRNGSHPIGSCSKYCIGLAAIGLVPRFNRFL
PAFRRLLPHLATPQSARVAMPQTA
>Mature_264_residues
MLENALTPISLADLNAKAEMLTRLDNKYVVPLSVLESLAPVLGDHFDILEIDGTRRFAYRTQYFDTPDMTSFRHHVQGRR
RRSKLRTRHYLSADICFVEVKLKSLRKVTVKKRLPHDPDALDQLTDPALQFAEQSHLGHYGRGLNAPYLPVMQMQYERMT
LVAREGGERLTIDRNLQFWNDRNEAATSPEMVVIETKSAFGRGIADSILRRNGSHPIGSCSKYCIGLAAIGLVPRFNRFL
PAFRRLLPHLATPQSARVAMPQTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29968; Mature: 29968

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENALTPISLADLNAKAEMLTRLDNKYVVPLSVLESLAPVLGDHFDILEIDGTRRFAYR
CCCCCCCCCCHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEE
TQYFDTPDMTSFRHHVQGRRRRSKLRTRHYLSADICFVEVKLKSLRKVTVKKRLPHDPDA
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHCCCCCCHH
LDQLTDPALQFAEQSHLGHYGRGLNAPYLPVMQMQYERMTLVAREGGERLTIDRNLQFWN
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEECC
DRNEAATSPEMVVIETKSAFGRGIADSILRRNGSHPIGSCSKYCIGLAAIGLVPRFNRFL
CCCCCCCCCCEEEEECCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PAFRRLLPHLATPQSARVAMPQTA
HHHHHHHHHHCCCCCCEECCCCCC
>Mature Secondary Structure
MLENALTPISLADLNAKAEMLTRLDNKYVVPLSVLESLAPVLGDHFDILEIDGTRRFAYR
CCCCCCCCCCHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEE
TQYFDTPDMTSFRHHVQGRRRRSKLRTRHYLSADICFVEVKLKSLRKVTVKKRLPHDPDA
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHCCCCCCHH
LDQLTDPALQFAEQSHLGHYGRGLNAPYLPVMQMQYERMTLVAREGGERLTIDRNLQFWN
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEECC
DRNEAATSPEMVVIETKSAFGRGIADSILRRNGSHPIGSCSKYCIGLAAIGLVPRFNRFL
CCCCCCCCCCEEEEECCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PAFRRLLPHLATPQSARVAMPQTA
HHHHHHHHHHCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA