Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680624

Identifier: 110680624

GI number: 110680624

Start: 3328943

End: 3329038

Strand: Direct

Name: 110680624

Synonym: RD1_3458

Alternate gene names: NA

Gene position: 3328943-3329038 (Clockwise)

Preceding gene: 110680623

Following gene: 110680628

Centisome position: 80.54

GC content: 51.04

Gene sequence:

>96_bases
ATGCTCGATTGCGCCACTCTGTCGCTTAACGGAGCCGAAGTTGCCGGCATGGATCGCGATTTCATGTACTTCGGTAACAA
CGTCTCAACCACATAA

Upstream 100 bases:

>100_bases
CAGATCCTGTCCAACAAATGGGGAGTAGCTCACGTCCACCTACACCCTGTCTACGCTACGCCATGCGGATGATTGGGTCA
AAAGCCAGCAGAGCTTCAAA

Downstream 100 bases:

>100_bases
GCAGCGCAAGACGTAACACGCAGCGGACCTTGAAAGCGTAGCTTTCAGGGCTCGCTACGTGACTAGAAGGTTTCAGTGAA
CACATCCGCACACATGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 31; Mature: 31

Protein sequence:

>31_residues
MLDCATLSLNGAEVAGMDRDFMYFGNNVSTT

Sequences:

>Translated_31_residues
MLDCATLSLNGAEVAGMDRDFMYFGNNVSTT
>Mature_31_residues
MLDCATLSLNGAEVAGMDRDFMYFGNNVSTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3345; Mature: 3345

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
9.7 %Met     (Translated Protein)
12.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
9.7 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDCATLSLNGAEVAGMDRDFMYFGNNVSTT
CCCCEEEECCCCEECCCCCCEEEECCEECCC
>Mature Secondary Structure
MLDCATLSLNGAEVAGMDRDFMYFGNNVSTT
CCCCEEEECCCCEECCCCCCEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA