| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is rhlE [H]
Identifier: 110680443
GI number: 110680443
Start: 3128176
End: 3129693
Strand: Direct
Name: rhlE [H]
Synonym: RD1_3263
Alternate gene names: 110680443
Gene position: 3128176-3129693 (Clockwise)
Preceding gene: 110680442
Following gene: 110680473
Centisome position: 75.69
GC content: 59.88
Gene sequence:
>1518_bases ATGCGGGCCGATGTGAGAGCTGCCGCGGGCCAAGAATGTGTCCGCAAATTACGGATACATATGATAAAATTCTCTGAGTT GAACCTCAATCCTAAAGTATTGAAGGCAATTGACGAAGCCGGGTACGAGACCCCCACCCCGATCCAAGCTGGTGCCATCC CTCCCGCCCTCGCAGGGCGGGACGTTCTGGGCATTGCGCAAACCGGGACCGGGAAAACCGCCAGTTTCACGCTGCCGATG ATTACCCTTTTGGCGCGTGGACGCGCCCGGGCCCGGATGCCGCGCAGTCTTGTGCTGTGCCCGACGCGTGAACTCGCAGC ACAAGTTGCCGAGAACTTCGACACGTACACGAAACACCTGAAACTGACCAAGGCGCTGCTGATTGGCGGCGTGTCGTTCA AGGAACAGGACAAGCTGATCGACAAGGGTGTCGATGTTCTGATTGCGACACCGGGACGGTTGCTGGACCATTTCGAACGC GGCAAACTGCTGCTGACCGGCGTGCAGATCATGGTGGTGGACGAAGCGGACAGAATGCTCGATATGGGATTCATTCCTGA CATCGAACGCATCTTCAGCCTGACGCCCTTTACCCGCCAGACGCTGTTCTTTTCGGCCACCATGGCTCCGGAAATTGAGC GGATCACGAACACCTTCCTGTCCGCACCCGAACGCATCGAGGTCGCGCGTCAGGCAACGACCAGCGAGACCATCGAGCAG GGTGTGCTGATGTTCAAGGCCTCGCGCAAGGACCGGGAAGGCACGGAAAAGCGCAAGGTGCTGCGTGCCCTGATTGATGC CGAAGGTGAAAAATGCACCAATGCCATCGTCTTTTGCAACCGCAAGACTGACGTGGACATCGTTGCCAAGTCACTGAAAA AATACAACTATGACGCAGCCCCTATTCACGGTGATCTGGATCAGAGCCAGCGGACACGCACGCTTGACGGGTTTCGCGAT GGCTCGTTGAAATTCCTGATCGCTTCTGATGTGGCGGCGCGCGGCCTTGACGTGCCTGCGGTGAGCCATGTCTTCAATTT TGATGTGCCCGGCCATGCCGAGGACTATGTCCACCGCATTGGCCGGACGGGTCGTGCGGGGCGGGACGGCAAGGCGATCA TGATCTGCGTGCCGCGCGACGAGCGCAACCTTGAAGATATCGAGCGCCTTGTGCAGCGCGAAATTCCGCGGCTGGACAAT CCACTGGGCACCAAGGAAGCGCCGAAGGAGAAAGCGCCGGACGGTGAGGCCGCCGCGTCGGAAAAGCCGAAACGGACCCG GACACGTGCACCGCGCAAAAGCGACAAACCGCAGGAAACAGAGGCCGAAAAAACGCCCGAAGAACCCACGGTGGACGCCA CACCTGCGCAGGAGCCCGCACAAAAACCTGCCCGCTCCCGGGGCGGTCGCAACCGCAACGCCAACACGGGCAAGGATCGC GGGCCGGGTGTCATCGGACTGGGCGATCACACGCCGGAGTTCATCGGGCTCAGCTTCAAAGATCGGATCGGCGGCTGA
Upstream 100 bases:
>100_bases AGCGCGCAAAGCCGACCTGTTCTGCGTCAACTGTTTGACCAATTGCCGATGAGTTGGTAAGCACGCACAGCATGTCGCGG CAGAGCCGCCGTTTTGGGCC
Downstream 100 bases:
>100_bases AGCGTCATGCGAAAAACCTGAATCACGCAACGCTGCCTGAAATCATAGATTTCAACGCGTTACGTGATGTTTGATGGTTC AGGTATTTCGTCAGACGCTC
Product: ATP-dependent RNA helicase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPM ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFER GKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAAPIHGDLDQSQRTRTLDGFRD GSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRIGRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDN PLGTKEAPKEKAPDGEAAASEKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR GPGVIGLGDHTPEFIGLSFKDRIGG
Sequences:
>Translated_505_residues MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPM ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFER GKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAAPIHGDLDQSQRTRTLDGFRD GSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRIGRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDN PLGTKEAPKEKAPDGEAAASEKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR GPGVIGLGDHTPEFIGLSFKDRIGG >Mature_505_residues MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPM ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFER GKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAAPIHGDLDQSQRTRTLDGFRD GSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRIGRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDN PLGTKEAPKEKAPDGEAAASEKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR GPGVIGLGDHTPEFIGLSFKDRIGG
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=37.2750642673522, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=36.5333333333333, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI21071032, Length=380, Percent_Identity=39.2105263157895, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI301171467, Length=399, Percent_Identity=37.593984962406, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI87196351, Length=399, Percent_Identity=37.593984962406, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI301171475, Length=399, Percent_Identity=37.593984962406, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI45446747, Length=382, Percent_Identity=35.3403141361257, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446743, Length=382, Percent_Identity=35.3403141361257, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI169881239, Length=399, Percent_Identity=36.8421052631579, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI13514809, Length=399, Percent_Identity=36.8421052631579, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI148613856, Length=379, Percent_Identity=37.7308707124011, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI38201710, Length=379, Percent_Identity=37.7308707124011, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI4758138, Length=388, Percent_Identity=37.6288659793814, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=36.5333333333333, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI224593278, Length=365, Percent_Identity=36.7123287671233, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI41327773, Length=369, Percent_Identity=34.6883468834688, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI222352149, Length=412, Percent_Identity=34.9514563106796, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI13129006, Length=403, Percent_Identity=36.7245657568238, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI164664518, Length=417, Percent_Identity=33.5731414868106, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI50659095, Length=391, Percent_Identity=36.0613810741688, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=35.15625, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=36.8131868131868, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI188035877, Length=386, Percent_Identity=36.0103626943005, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=33.4224598930481, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI13514831, Length=382, Percent_Identity=34.5549738219895, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI55749865, Length=411, Percent_Identity=32.8467153284672, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=36.1413043478261, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI51094101, Length=379, Percent_Identity=34.0369393139842, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI164419743, Length=379, Percent_Identity=34.0369393139842, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=35.2785145888594, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI38327634, Length=378, Percent_Identity=34.3915343915344, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI21040371, Length=374, Percent_Identity=31.8181818181818, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI4758112, Length=384, Percent_Identity=30.7291666666667, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI18375623, Length=384, Percent_Identity=30.7291666666667, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=32.7956989247312, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI8922886, Length=391, Percent_Identity=32.7365728900256, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI6005743, Length=391, Percent_Identity=32.2250639386189, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI38569505, Length=379, Percent_Identity=31.1345646437995, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI38569503, Length=379, Percent_Identity=31.1345646437995, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=30.2884615384615, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241022, Length=374, Percent_Identity=32.0855614973262, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI164419732, Length=355, Percent_Identity=32.6760563380282, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI9506931, Length=412, Percent_Identity=27.4271844660194, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=29.7935103244838, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=31.728045325779, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI9966805, Length=342, Percent_Identity=30.4093567251462, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI256223453, Length=376, Percent_Identity=28.9893617021277, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=30.1790281329923, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI154759257, Length=480, Percent_Identity=26.4583333333333, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=36.8663594470046, Blast_Score=122, Evalue=8e-28, Organism=Escherichia coli, GI1787016, Length=394, Percent_Identity=44.6700507614213, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI87082221, Length=379, Percent_Identity=43.5356200527704, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI1790214, Length=426, Percent_Identity=38.7323943661972, Blast_Score=268, Evalue=5e-73, Organism=Escherichia coli, GI1787605, Length=393, Percent_Identity=40.2035623409669, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1788930, Length=380, Percent_Identity=38.9473684210526, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI48994977, Length=402, Percent_Identity=24.3781094527363, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32565321, Length=388, Percent_Identity=38.1443298969072, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI71995718, Length=395, Percent_Identity=38.4810126582278, Blast_Score=254, Evalue=9e-68, Organism=Caenorhabditis elegans, GI17510307, Length=396, Percent_Identity=38.3838383838384, Blast_Score=251, Evalue=7e-67, Organism=Caenorhabditis elegans, GI17510309, Length=396, Percent_Identity=38.3838383838384, Blast_Score=251, Evalue=8e-67, Organism=Caenorhabditis elegans, GI71995514, Length=396, Percent_Identity=37.8787878787879, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71995724, Length=376, Percent_Identity=37.7659574468085, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=37.5, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=35.3260869565217, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=35.2, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=35.0515463917526, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI86570094, Length=371, Percent_Identity=36.3881401617251, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17507945, Length=399, Percent_Identity=35.8395989974937, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17552642, Length=384, Percent_Identity=36.4583333333333, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI115533224, Length=374, Percent_Identity=35.2941176470588, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=32.2493224932249, Blast_Score=215, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=34.2105263157895, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=34.3575418994413, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=34.3575418994413, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=34.7480106100796, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=33.983286908078, Blast_Score=198, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17509811, Length=392, Percent_Identity=30.6122448979592, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI115532548, Length=384, Percent_Identity=31.5104166666667, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI115532546, Length=390, Percent_Identity=31.2820512820513, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17507879, Length=395, Percent_Identity=33.9240506329114, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507881, Length=398, Percent_Identity=32.6633165829146, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71982858, Length=359, Percent_Identity=30.9192200557103, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI193208216, Length=412, Percent_Identity=29.126213592233, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=30.2030456852792, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=29.3827160493827, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536099, Length=405, Percent_Identity=29.3827160493827, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=29.3827160493827, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI193206561, Length=373, Percent_Identity=30.5630026809651, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI71990816, Length=384, Percent_Identity=30.7291666666667, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17556951, Length=358, Percent_Identity=29.8882681564246, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17508543, Length=391, Percent_Identity=28.9002557544757, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI32564046, Length=384, Percent_Identity=29.6875, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=24.578313253012, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=29.0055248618785, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=30.2670623145401, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=33.9805825242718, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71997889, Length=356, Percent_Identity=28.3707865168539, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=41.1214953271028, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71987997, Length=369, Percent_Identity=23.8482384823848, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71987993, Length=369, Percent_Identity=23.8482384823848, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=36.968085106383, Blast_Score=263, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=395, Percent_Identity=37.7215189873418, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=397, Percent_Identity=37.5314861460957, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=39.9441340782123, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=40.3361344537815, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=382, Percent_Identity=36.3874345549738, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=35.2150537634409, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=367, Percent_Identity=35.6948228882834, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320449, Length=423, Percent_Identity=34.0425531914894, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=36.7123287671233, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=32.3809523809524, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=382, Percent_Identity=35.0785340314136, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=382, Percent_Identity=35.0785340314136, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322427, Length=384, Percent_Identity=33.8541666666667, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=387, Percent_Identity=31.5245478036176, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=33.2432432432432, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320119, Length=387, Percent_Identity=30.749354005168, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=33.6043360433604, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=375, Percent_Identity=30.1333333333333, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=368, Percent_Identity=34.5108695652174, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=423, Percent_Identity=30.0236406619385, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=397, Percent_Identity=30.7304785894207, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=420, Percent_Identity=29.7619047619048, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=364, Percent_Identity=25.2747252747253, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=412, Percent_Identity=24.7572815533981, Blast_Score=104, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323306, Length=321, Percent_Identity=24.6105919003115, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323844, Length=365, Percent_Identity=20.2739726027397, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI17977678, Length=388, Percent_Identity=37.3711340206186, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24584994, Length=399, Percent_Identity=35.3383458646617, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24585582, Length=376, Percent_Identity=36.1702127659575, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI17985987, Length=403, Percent_Identity=37.2208436724566, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24584399, Length=365, Percent_Identity=36.986301369863, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI28574962, Length=382, Percent_Identity=36.1256544502618, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24662330, Length=387, Percent_Identity=35.6589147286822, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=35.3887399463807, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=36.6310160427808, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24644483, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644479, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI281361218, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644481, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644487, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI45551833, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644485, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24645031, Length=375, Percent_Identity=36.5333333333333, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI18857967, Length=378, Percent_Identity=36.2433862433862, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24582080, Length=376, Percent_Identity=35.6382978723404, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24582078, Length=376, Percent_Identity=35.6382978723404, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI17136248, Length=376, Percent_Identity=35.6382978723404, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24582075, Length=376, Percent_Identity=35.6382978723404, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24583281, Length=382, Percent_Identity=33.7696335078534, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=33.7696335078534, Blast_Score=215, Evalue=7e-56, Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=33.9572192513369, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=33.2432432432432, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI17136814, Length=370, Percent_Identity=35.9459459459459, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI28571808, Length=356, Percent_Identity=33.4269662921348, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI28571809, Length=356, Percent_Identity=33.4269662921348, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=35.3312302839117, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24642822, Length=391, Percent_Identity=30.4347826086957, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581954, Length=361, Percent_Identity=30.4709141274238, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24581952, Length=361, Percent_Identity=30.4709141274238, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24581956, Length=361, Percent_Identity=30.4709141274238, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=31.7460317460317, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17647335, Length=395, Percent_Identity=29.620253164557, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=31.2997347480106, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=27.6807980049875, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI20130173, Length=333, Percent_Identity=28.8288288288288, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=30.1538461538462, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=28.6472148541114, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI17136666, Length=404, Percent_Identity=28.4653465346535, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24640164, Length=356, Percent_Identity=26.123595505618, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI28571338, Length=256, Percent_Identity=30.859375, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI18859659, Length=256, Percent_Identity=30.859375, Blast_Score=118, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55612; Mature: 55612
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGR CCCCHHHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DVLGIAQTGTGKTASFTLPMITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHL CEEEEEECCCCCCEEHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHH KLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRML HHHHHHHHCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHH DMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ HCCCCCCHHHHHHCCCCHHHHEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAA HHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC PIHGDLDQSQRTRTLDGFRDGSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRI CCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCHHHHHEECCCCCCHHHHHHHH GRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDNPLGTKEAPKEKAPDGEAAAS CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC EKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR CCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GPGVIGLGDHTPEFIGLSFKDRIGG CCCEEECCCCCCHHCCCCHHHCCCC >Mature Secondary Structure MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGR CCCCHHHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DVLGIAQTGTGKTASFTLPMITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHL CEEEEEECCCCCCEEHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHH KLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRML HHHHHHHHCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHH DMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ HCCCCCCHHHHHHCCCCHHHHEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAA HHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC PIHGDLDQSQRTRTLDGFRDGSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRI CCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCHHHHHEECCCCCCHHHHHHHH GRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDNPLGTKEAPKEKAPDGEAAAS CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC EKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR CCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GPGVIGLGDHTPEFIGLSFKDRIGG CCCEEECCCCCCHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]