| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mazG [H]
Identifier: 110680320
GI number: 110680320
Start: 3009511
End: 3010326
Strand: Direct
Name: mazG [H]
Synonym: RD1_3133
Alternate gene names: 110680320
Gene position: 3009511-3010326 (Clockwise)
Preceding gene: 110680315
Following gene: 110680321
Centisome position: 72.81
GC content: 61.27
Gene sequence:
>816_bases ATGGCAGATGACCTGATCCACGACCCTGATGGGGGAATTGAACGCCTGCTTGCGATCATGCGCCGCCTGCGTGACCCGGA AACGGGCTGCCCGTGGGACATCGAGCAGGATTTCGACAGCATCGCCCCCTACACAATCGAAGAGGCCTATGAGGTCGCAG ACGCCATCGCACGCAAGGACTGGCGCGATCTTGAGGGGGAGTTGGGCGATCTGCTGCTGCAAACCGTTTATCATACGGCC ATGGGTGCCGAAGGCGGTCACTTCACCTTTCAGTCGGTGGTGCGCAAGATCAGCGACAAGATGGTCGCCCGCCACCCGCA TGTTTTTGGCGATGAGAGCCGCGACAAGTCAGCGGACCAGCAAACCGCCGATTGGGAAAAGATAAAGGCCCGCGAACGTG CAGAAAACGCGCAACAGGGCACGCTGGATGGTGTGGCCATTGGCCTGCCCGCGCTGCTGCGCGCGCTCAAGCTGCAAAAA CGCGCCGCACGGGTCGGATTTGACTGGCCCTCCACCGATGAAGTCCTGGACAAAATCACCGAAGAGGCTGCCGAGTTGGT CGAGGCGCGCGATCGTCTCACGCAAGCAGAAATCGAAGAGGAGTTCGGCGATCTGCTGTTCGTGATGGCCAATCTGGGCC GTCACCTCGGACTTGATCCCGAAGCCGCCCTGCGCGCTGCCAACGCGAAATTCACCCGTCGTTTCGAAGGGGTCGAAGCC AAGCTGGCCGCCATGGGTAAGACCCCCGCCGACAGCGATCTGGCTGAGATGGATGCGCTTTGGGATCAGGTCAAGGCGGA GAGCCGGAAGCGCTAG
Upstream 100 bases:
>100_bases CCGCGCTCATGTCAGCGATCCGGTTTACGACGGGCATGCTCTGGACTCCTTGTCGAATGTTTTGTCAGGTGCATCTGACA CCGAAGCGGGAGCGGCTGCA
Downstream 100 bases:
>100_bases GTCCGCGCCGGTCTTGCAGCGCCTGCTCGCAATTCGGCGCGCACAGTTGCGCCCGCCGGCGTGACGGACGCGGGGCGGCG CATGTGTATGTCGGTGCATC
Product: nucleoside triphosphate pyrophosphohydrolase
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MADDLIHDPDGGIERLLAIMRRLRDPETGCPWDIEQDFDSIAPYTIEEAYEVADAIARKDWRDLEGELGDLLLQTVYHTA MGAEGGHFTFQSVVRKISDKMVARHPHVFGDESRDKSADQQTADWEKIKARERAENAQQGTLDGVAIGLPALLRALKLQK RAARVGFDWPSTDEVLDKITEEAAELVEARDRLTQAEIEEEFGDLLFVMANLGRHLGLDPEAALRAANAKFTRRFEGVEA KLAAMGKTPADSDLAEMDALWDQVKAESRKR
Sequences:
>Translated_271_residues MADDLIHDPDGGIERLLAIMRRLRDPETGCPWDIEQDFDSIAPYTIEEAYEVADAIARKDWRDLEGELGDLLLQTVYHTA MGAEGGHFTFQSVVRKISDKMVARHPHVFGDESRDKSADQQTADWEKIKARERAENAQQGTLDGVAIGLPALLRALKLQK RAARVGFDWPSTDEVLDKITEEAAELVEARDRLTQAEIEEEFGDLLFVMANLGRHLGLDPEAALRAANAKFTRRFEGVEA KLAAMGKTPADSDLAEMDALWDQVKAESRKR >Mature_270_residues ADDLIHDPDGGIERLLAIMRRLRDPETGCPWDIEQDFDSIAPYTIEEAYEVADAIARKDWRDLEGELGDLLLQTVYHTAM GAEGGHFTFQSVVRKISDKMVARHPHVFGDESRDKSADQQTADWEKIKARERAENAQQGTLDGVAIGLPALLRALKLQKR AARVGFDWPSTDEVLDKITEEAAELVEARDRLTQAEIEEEFGDLLFVMANLGRHLGLDPEAALRAANAKFTRRFEGVEAK LAAMGKTPADSDLAEMDALWDQVKAESRKR
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=255, Percent_Identity=54.9019607843137, Blast_Score=268, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 30313; Mature: 30182
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDLIHDPDGGIERLLAIMRRLRDPETGCPWDIEQDFDSIAPYTIEEAYEVADAIARKD CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH WRDLEGELGDLLLQTVYHTAMGAEGGHFTFQSVVRKISDKMVARHPHVFGDESRDKSADQ HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH QTADWEKIKARERAENAQQGTLDGVAIGLPALLRALKLQKRAARVGFDWPSTDEVLDKIT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EEAAELVEARDRLTQAEIEEEFGDLLFVMANLGRHLGLDPEAALRAANAKFTRRFEGVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KLAAMGKTPADSDLAEMDALWDQVKAESRKR HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADDLIHDPDGGIERLLAIMRRLRDPETGCPWDIEQDFDSIAPYTIEEAYEVADAIARKD CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH WRDLEGELGDLLLQTVYHTAMGAEGGHFTFQSVVRKISDKMVARHPHVFGDESRDKSADQ HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH QTADWEKIKARERAENAQQGTLDGVAIGLPALLRALKLQKRAARVGFDWPSTDEVLDKIT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EEAAELVEARDRLTQAEIEEEFGDLLFVMANLGRHLGLDPEAALRAANAKFTRRFEGVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KLAAMGKTPADSDLAEMDALWDQVKAESRKR HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]