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The map label for this gene is rhaM

Identifier: 110680266

GI number: 110680266

Start: 2948378

End: 2948695

Strand: Reverse

Name: rhaM

Synonym: RD1_3076

Alternate gene names: 110680266

Gene position: 2948695-2948378 (Counterclockwise)

Preceding gene: 110680267

Following gene: 110680265

Centisome position: 71.34

GC content: 60.69

Gene sequence:

>318_bases
ATGAGCGAACGCTATGTGTTCAGGATGCGGCTCAACCCCGGCAAGCAGGCGGAATACCAGCGCCGCCATGATGAGATCTG
GCCCGAGTTGGTCGATCTGCTGCGGGCCGCCAAGATCTCTGACTACTCCATTCATCTGGACCCGGATACGCATGTGCTGA
TCGGCGTGCTGATCCGCCCGCAGGACCATGGGATGGCGGCGCTTCCCGATCACCCGATCATGCGGAAATGGTGGGCGCAT
ATGGCCGATATCATGGAGACGGGGCCGGATGATGCACCCATTGCGGTCCCGCTGACGCCTGTGTTTCACATGCCATGA

Upstream 100 bases:

>100_bases
ACGTGCCGGGTATCGTGATGTCCATCTTTATCGGTCTGCTGTTGATTGGCGTTATTGCCTTGCCGCGCCTTTGGACCATG
CTCGCATCGCGGGGCAAATC

Downstream 100 bases:

>100_bases
AAAACCCGCGCCACATTGCCGTAATTGACATCGGGAAAACGAACGCAAAACTCGCGCTTGTTGATCTGCAGAACCATCGG
GAAATTGCCGTGCTGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSERYVFRMRLNPGKQAEYQRRHDEIWPELVDLLRAAKISDYSIHLDPDTHVLIGVLIRPQDHGMAALPDHPIMRKWWAH
MADIMETGPDDAPIAVPLTPVFHMP

Sequences:

>Translated_105_residues
MSERYVFRMRLNPGKQAEYQRRHDEIWPELVDLLRAAKISDYSIHLDPDTHVLIGVLIRPQDHGMAALPDHPIMRKWWAH
MADIMETGPDDAPIAVPLTPVFHMP
>Mature_104_residues
SERYVFRMRLNPGKQAEYQRRHDEIWPELVDLLRAAKISDYSIHLDPDTHVLIGVLIRPQDHGMAALPDHPIMRKWWAHM
ADIMETGPDDAPIAVPLTPVFHMP

Specific function: Involved in the anomeric conversion of L-rhamnose

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family

Homologues:

Organism=Escherichia coli, GI1790335, Length=102, Percent_Identity=34.3137254901961, Blast_Score=82, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAM_ROSDO (Q164K6)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_683273.1
- ProteinModelPortal:   Q164K6
- SMR:   Q164K6
- STRING:   Q164K6
- GeneID:   4198702
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_3076
- NMPDR:   fig|375451.6.peg.2855
- eggNOG:   COG3254
- HOGENOM:   HBG649684
- OMA:   DEYEKRH
- PhylomeDB:   Q164K6
- BioCyc:   RDEN375451:RD1_3076-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01663
- InterPro:   IPR013448
- InterPro:   IPR008000
- TIGRFAMs:   TIGR02625

Pfam domain/function: PF05336 DUF718

EC number: NA

Molecular weight: Translated: 12187; Mature: 12056

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: ACT_SITE 23-23 BINDING 19-19 BINDING 42-42

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERYVFRMRLNPGKQAEYQRRHDEIWPELVDLLRAAKISDYSIHLDPDTHVLIGVLIRP
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECC
QDHGMAALPDHPIMRKWWAHMADIMETGPDDAPIAVPLTPVFHMP
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEECCC
>Mature Secondary Structure 
SERYVFRMRLNPGKQAEYQRRHDEIWPELVDLLRAAKISDYSIHLDPDTHVLIGVLIRP
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECC
QDHGMAALPDHPIMRKWWAHMADIMETGPDDAPIAVPLTPVFHMP
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA